Structural Classification of Proteins
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Family: Cytidylytransferase

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Nucleotide-diphospho-sugar transferases [53447]
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. Superfamily: Nucleotide-diphospho-sugar transferases [53448]
    link to SUPERFAMILY database - Superfamily
  5. Family: Cytidylytransferase [68901]

Protein Domains:

  1. 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) [64140]
    1. Escherichia coli [TaxId: 562] [64141] (6) picpic
    2. Neisseria gonorrhoeae [TaxId: 485] [102605] (2) picpic
    3. Thermotoga maritima [TaxId: 2336] [117699] (1) picpic
      SQ Q9X1B3
    4. Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702] [142690] (1) picpic
      SQ P69834 75-300
  2. CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase [64143]
    1. Escherichia coli, KpsU [TaxId: 562] [64144] (8) picpic
      capsule-specific enzyme
    2. Escherichia coli, KdsB [TaxId: 562] [102606] (1) picpic
    3. Haemophilus influenzae [TaxId: 727] [102607] (2) picpic
  3. CTP:phosphocholine cytidylytransferase LicC [69569]
    1. Streptococcus pneumoniae [TaxId: 1313] [69570] (2) picpic
  4. CMP acylneuraminate synthetase [53456]
    a sialic acid activating synthetase
    1. Neisseria meningitidis [TaxId: 487] [53457] (2) picpic
    2. Mouse (Mus musculus) [TaxId: 10090] [102608] (1) picpic
  5. Glucose-1-phosphate cytidylyltransferase RfbF [110689]
    1. Salmonella typhimurium [TaxId: 90371] [110690] (2) picpic
      SQ P26396 2-257
  6. IspD/IspF bifunctional enzyme, CDP-me synthase domain [117700]
    1. Campylobacter jejuni [TaxId: 197] [117701] (2) picpic
      SQ Q9PM68
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk