Structural Classification of Proteins
home mail help root up expand collapse

Protein: 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) from Neisseria gonorrhoeae [TaxId: 485]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Nucleotide-diphospho-sugar transferases [53447]
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. Superfamily: Nucleotide-diphospho-sugar transferases [53448]
    link to SUPERFAMILY database - Superfamily
  5. Family: Cytidylytransferase [68901]
  6. Protein: 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) [64140]
  7. Species: Neisseria gonorrhoeae [TaxId: 485] [102605]

PDB Entry Domains:

  1. 1vgw picpic
    structural genomics
    1. chain a [100612] picpiclink
    2. chain b [100613] picpiclink
    3. chain c [100614] picpiclink
    4. chain d [100615] picpiclink
    5. chain e [100616] picpiclink
    6. chain f [100617] picpiclink
  2. 1vgz picpic
    structural genomics
    complexed with so4
    1. chain a [100624] picpiclink
    2. chain b [100625] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk