Structural Classification of Proteins
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Protein: Pyruvate oxidase from Aerococcus viridans [TaxId: 1377]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Thiamin diphosphate-binding fold (THDP-binding) [52517]
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. Superfamily: Thiamin diphosphate-binding fold (THDP-binding) [52518]
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
    link to SUPERFAMILY database - Superfamily
  5. Family: Pyruvate oxidase and decarboxylase PP module [88749]
    the N-terminal, Pyr module is separated from the C-terminal, PP module by an alpa/beta domain of Rossmann-like topology
  6. Protein: Pyruvate oxidase [88754]
  7. Species: Aerococcus viridans [TaxId: 1377] [142207]

PDB Entry Domains:

  1. 2dji picpicxrefxref
    automatically matched to 1V5E A:364-592
    complexed with fad, so4
    1. region a:364-592 [131546] picpiclink
  2. 1v5e picpicxrefxref
    complexed with fad, so4
    1. region a:364-592 [119846] picpiclink
  3. 1v5f picpicxrefxref
    automatically matched to 1V5E A:364-592
    complexed with fad, mg, so4, tpp
    1. region a:364-592 [119849] picpiclink
  4. 1v5g picpicxrefxref
    automatically matched to 1V5E A:364-592
    complexed with fad, htl, mg
    1. region a:364-592 [119852] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk