Structural Classification of Proteins
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Protein: Pyruvate-ferredoxin oxidoreductase, PFOR, domain I from Desulfovibrio africanus [TaxId: 873]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Thiamin diphosphate-binding fold (THDP-binding) [52517]
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. Superfamily: Thiamin diphosphate-binding fold (THDP-binding) [52518]
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
    link to SUPERFAMILY database - Superfamily
  5. Family: PFOR Pyr module [88746]
    domains VI, I and II are arranged in the same way as the TK PP, Pyr and C domains
  6. Protein: Pyruvate-ferredoxin oxidoreductase, PFOR, domain I [88747]
  7. Species: Desulfovibrio africanus [TaxId: 873] [88748]

PDB Entry Domains:

  1. 2c42 picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with ca, mg, pyr, sf4, tpp
    1. region a:2-258 [129790] picpiclink
  2. 2c42 picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with ca, mg, pyr, sf4, tpp
    1. region b:2-258 [129795] picpiclink
  3. 2c3m picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with ca, cl, mg, sf4, tpp
    1. region a:2-258 [129740] picpiclink
  4. 2c3m picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with ca, cl, mg, sf4, tpp
    1. region b:2-258 [129745] picpiclink
  5. 2c3y picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with ca, co2, htl, mg, sf4
    1. region a:2-258 [129780] picpiclink
  6. 2c3y picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with ca, co2, htl, mg, sf4
    1. region b:2-258 [129785] picpiclink
  7. 1kek picpicxrefxrefxrefxref
    complexed with ca, co2, fs4, htl, mg
    1. region a:2-258 [68524] picpiclink
    2. region b:2-258 [68529] picpiclink
  8. 2c3p picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with 1tp, ca, mg, sf4
    1. region a:2-258 [129760] picpiclink
  9. 2c3p picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with 1tp, ca, mg, sf4
    1. region b:2-258 [129765] picpiclink
  10. 2uza picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with ca, co2, htl, mg, sf4
    1. region a:2-258 [152325] picpiclink
  11. 2uza picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with ca, co2, htl, mg, sf4
    1. region b:2-258 [152330] picpiclink
  12. 2c3u picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with 2tp, ca, mg, pyr, sf4
    1. region a:2-258 [129770] picpiclink
  13. 2c3u picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with 2tp, ca, mg, pyr, sf4
    1. region b:2-258 [129775] picpiclink
  14. 1b0p picpicxrefxrefxrefxref
    complexed with ca, fs4, mg, tpp
    1. region a:2-258 [31831] picpiclink
    2. region b:2-258 [31833] picpiclink
  15. 2c3o picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with ca, mg, pyr, sf4, tpp
    1. region a:2-258 [129750] picpiclink
  16. 2c3o picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1b0pa1
    complexed with ca, mg, pyr, sf4, tpp
    1. region b:2-258 [129755] picpiclink
  17. 2pda picpicxrefxrefxrefxref
    complexed with ca, fs4, mg, pyr, tpp
    1. region a:2-258 [31835] picpiclink
    2. region b:2-258 [31837] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk