Structural Classification of Proteins
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Protein: Plant alpha-amylase from Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: (Trans)glycosidases [51445]
    link to SUPERFAMILY database - Superfamily
  5. Family: Amylase, catalytic domain [51446]
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. Protein: Plant alpha-amylase [51474]
  7. Species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513] [89465]

PDB Entry Domains:

  1. 1ht6 picpicxref
    complexed with ca, edo
    1. region a:1-347 [83630] picpiclink
  2. 2qpu picpicxrefxrefxref
    automatically matched to d1ht6a2
    complexed with ca, edo, glc, qps, qpu; mutant
    1. region a:1-347 [151210] picpiclink
  3. 2qpu picpicxrefxrefxref
    automatically matched to d1ht6a2
    complexed with ca, edo, glc, qps, qpu; mutant
    1. region b:1-347 [151212] picpiclink
  4. 2qpu picpicxrefxrefxref
    automatically matched to d1ht6a2
    complexed with ca, edo, glc, qps, qpu; mutant
    1. region c:1-347 [151214] picpiclink
  5. 1rp9 picpicxref
    automatically matched to d1ht6a2
    complexed with bgc, ca, daf, glc; mutant
    1. region a:1-347 [118786] picpiclink
  6. 1rp8 picpicxref
    automatically matched to d1ht6a2
    complexed with bgc, ca, glc; mutant
    1. region a:1-347 [118784] picpiclink
  7. 1p6w picpicxref
    complexed with ca, glc, gsd, ma3
    1. region a:1-347 [94194] picpiclink
  8. 1rpk picpicxref
    automatically matched to d1ht6a2
    complexed with ca, daf, glc
    1. region a:1-347 [118788] picpiclink
  9. 3bsg picpicxref
    automatically matched to d1ht6a2
    complexed with ca; mutant
    1. region a:1-347 [155526] picpiclink
  10. 2qps picpicxref
    automatically matched to d1ht6a2
    complexed with ca; mutant
    1. region a:1-347 [151208] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk