Structural Classification of Proteins
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Superfamily: (Trans)glycosidases

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: (Trans)glycosidases [51445]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Amylase, catalytic domain [51446] (54) picpic
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  2. beta-glycanases [51487] (54) picpic
    consist of a number of sequence families
  3. Putative alpha-L-fucosidase, catalytic domain [102079] (1) picpic
    glycosyl hydrolase family 29; contains additional beta-barrel with a topological similarity to the C-terminal domain of alpha amylases
  4. Family 1 of glycosyl hydrolase [51521] (15) picpic
  5. Type II chitinase [51534] (22) picpic
    glycosylase family 18
  6. 1,4-beta-N-acetylmuraminidase [63912] (3) picpic
    Glycosyl hydrolase family 25; probably have evolved from a type II chitinase ancestor
    permutation of the common fold; strand 8 is antiparallel to the rest of the barrel
  7. beta-N-acetylhexosaminidase catalytic domain [51550] (5) picpic
    Glycosyl hydrolase family 20, GH20
  8. alpha-D-glucuronidase/Hyaluronidase catalytic domain [82253] (4) picpic
    Glycosyl hydrolase family 67, GH67; structurally related to GH20; contains extra C-terminal alpha-helical subdomain
  9. NagZ-like [51553] (2) picpic
    Pfam 00933; Glycosyl hydrolase family 3 domain
  10. Bee venom hyaluronidase [69387] (1) picpic
    distorted barrel lacks the second strand
  11. Outer surface protein, N-terminal domain [110354] (1) picpic
    corresponds to the N-terminal part of Pfam 05913
  12. YicI catalytic domain-like [117372] (2) picpic
  13. Glycosyl hydrolases family 35 catalytic domain [117375] (1) picpic
    Pfam 01301
  14. TM1410-like [141796] (1) picpic
    Pfam 03537
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk