Structural Classification of Proteins
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Protein: KDPG aldolase from Escherichia coli [TaxId: 562]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Aldolase [51569]
    Common fold covers whole protein structure
    link to SUPERFAMILY database - Superfamily
  5. Family: Class I aldolase [51570]
    the catalytic lysine forms schiff-base intermediate with substrate
    possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels
  6. Protein: KDPG aldolase [51584]
  7. Species: Escherichia coli [TaxId: 562] [51585]

PDB Entry Domains:

  1. 1wbh picpic
    complexed with po4; mutant
    1. region a:1-213 [120845] picpiclink
  2. 1wbh picpic
    automatically matched to 1WBH A:1-213
    complexed with po4; mutant
    1. region b:1-213 [120846] picpiclink
  3. 1wbh picpic
    automatically matched to 1WBH A:1-213
    complexed with po4; mutant
    1. region c:1-213 [120847] picpiclink
  4. 2c0a picpic
    automatically matched to 1WBH A:1-213
    complexed with po4; mutant
    1. region a:1-213 [129579] picpiclink
  5. 2c0a picpic
    automatically matched to 1WBH A:1-213
    complexed with po4; mutant
    1. region b:1-213 [129580] picpiclink
  6. 2c0a picpic
    automatically matched to 1WBH A:1-213
    complexed with po4; mutant
    1. region c:1-213 [129581] picpiclink
  7. 1eua picpic
    Schiff base intermediate
    complexed with act, pyr, so4
    1. chain a [29155] picpiclink
    2. chain b [29156] picpiclink
    3. chain c [29157] picpiclink
  8. 1eun picpic
    complexed with so4
    1. chain a [29158] picpiclink
    2. chain b [29159] picpiclink
    3. chain c [29160] picpiclink
  9. 1fq0 picpic
    complexed with cit
    1. chain a [29161] picpiclink
    2. chain b [29162] picpiclink
    3. chain c [29163] picpiclink
  10. 1fwr picpic
    complexed with cit; mutant
    1. chain a [29164] picpiclink
    2. chain b [29165] picpiclink
    3. chain c [29166] picpiclink
  11. 1wau picpic
    automatically matched to 1WBH A:1-213
    complexed with so4; mutant
    1. region a:1-213 [120821] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk