Structural Classification of Proteins
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Protein: Lysine-specific histone demethylase 1, LSD1 from Human (Homo sapiens) [TaxId: 9606]

SQ O60341 169-279

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: DNA/RNA-binding 3-helical bundle [46688]
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. Superfamily: Homeodomain-like [46689]
    consists only of helices
    link to SUPERFAMILY database - Superfamily
  5. Family: SWIRM domain [140222]
    Pfam 04433; contains extra N-terminal helix
  6. Protein: Lysine-specific histone demethylase 1, LSD1 [140227]
  7. Species: Human (Homo sapiens) [TaxId: 9606] [140228]
    SQ O60341 169-279

PDB Entry Domains:

  1. 2dw4 picpicxrefxref
    automatically matched to 2IW5 A:171-273
    complexed with fad
    1. region a:172-273 [146594] picpiclink
  2. 2z3y picpicxrefxref
    automatically matched to 2IW5 A:171-273
    complexed with f2n
    1. region a:172-273 [154024] picpiclink
  3. 2z5u picpicxrefxref
    automatically matched to 2IW5 A:171-273
    complexed with fa9
    1. region a:172-273 [154167] picpiclink
  4. 2iw5 picpicxrefxrefxref
    complexed with cl, fad, gol, nh4
    1. region a:171-273 [145539] picpiclink
  5. 2ejr picpicxrefxref
    automatically matched to 2IW5 A:171-273
    complexed with f2n
    1. region a:172-273 [146877] picpiclink
  6. 2uxx picpicxrefxref
    automatically matched to 2IW5 A:171-273
    complexed with cl, fa9, gol
    1. region a:171-273 [152310] picpiclink
  7. 2uxn picpicxrefxrefxref
    automatically matched to 2IW5 A:171-273
    complexed with cl, fda, gol, lyp
    1. region a:173-273 [145760] picpiclink
  8. 2h94 picpicxrefxref
    automatically matched to 2IW5 A:171-273
    complexed with fad, hg
    1. region a:172-273 [147245] picpiclink
  9. 2com picpic
    1. region a:8-118 [130679] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk