Structural Classification of Proteins

Family: SWIRM domain

: Pfam 04433; contains extra N-terminal helix

Lineage:

Root: scop
Class: All alpha proteins [46456]
Fold: DNA/RNA-binding 3-helical bundle [46688]
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily: Homeodomain-like [46689]
consists only of helices
uperfamily
Family: SWIRM domain [140222]
Pfam 04433; contains extra N-terminal helix

Protein Domains:

Transcription regulatory protein swi3 [140223]
1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [140224] (1)
  SQ P32591 311-395
  1. 2fq3
    1. region a:311-395 [133936]
Transcriptional adaptor 2-like, TADA2L [140225]
1. Mouse (Mus musculus) [TaxId: 10090] [140226] (3)
  SQ Q8CHV6 343-443! SQ Q8CHV6 355-443
  1. 2cuj
    1. region a:8-108 [130812]
  2. 2aqe
    1. region a:2-90 [127179]
  3. 2aqf
    automatically matched to 2AQE A:2-90
    1. region a:2-90 [127180]
Lysine-specific histone demethylase 1, LSD1 [140227]
1. Human (Homo sapiens) [TaxId: 9606] [140228] (9)
  SQ O60341 169-279
  1. 2dw4
    automatically matched to 2IW5 A:171-273
    complexed with fad
    1. region a:172-273 [146594]
  2. 2z3y
    automatically matched to 2IW5 A:171-273
    complexed with f2n
    1. region a:172-273 [154024]
  3. 2z5u
    automatically matched to 2IW5 A:171-273
    complexed with fa9
    1. region a:172-273 [154167]
  4. 2iw5
    complexed with cl, fad, gol, nh4
    1. region a:171-273 [145539]
  5. 2ejr
    automatically matched to 2IW5 A:171-273
    complexed with f2n
    1. region a:172-273 [146877]
  6. 2uxx
    automatically matched to 2IW5 A:171-273
    complexed with cl, fa9, gol
    1. region a:171-273 [152310]
  7. 2uxn
    automatically matched to 2IW5 A:171-273
    complexed with cl, fda, gol, lyp
    1. region a:173-273 [145760]
  8. 2h94
    automatically matched to 2IW5 A:171-273
    complexed with fad, hg
    1. region a:172-273 [147245]
  9. 2com
    1. region a:8-118 [130679]