Structural Classification of Proteins

Superfamily: Cytochrome c

: covalently-bound heme completes the core
uperfamily

Lineage:

Root: scop
Class: All alpha proteins [46456]
Fold: Cytochrome c [46625]
core: 3 helices; folded leaf, opened
Superfamily: Cytochrome c [46626]
covalently-bound heme completes the core
uperfamily

Families:

monodomain cytochrome c [46627] (44)
1. Cytochrome c6 (synonym: cytochrome c553) [46628]
  1. Bacillus pasteurii [TaxId: 1474] [46629] (5)
    1. 1c75
      complexed with hem
      1. chain a [15796]
    2. 1b7v
      complexed with hem
      1. chain a [15797]
    3. 1k3h
      complexed with hec
      1. chain a [68112]
    4. 1k3g
      complexed with hec
      1. chain a [68111]
    5. 1n9c
      complexed with hec
      1. chain a [80340]
  2. Monoraphidium braunii [TaxId: 34112] [46630] (3)
    1. 1ctj
      complexed with hem
      1. chain a [15798]
    2. 1ced
      complexed with hem
      1. chain a [15799]
    3. 1a2s
      complexed with hec
      1. chain a [15800]
  3. Desulfovibrio vulgaris, different strains [TaxId: 881] [46631] (2)
    1. 1c53
      complexed with hem
      1. chain a [15801]
    2. 1dvh
      complexed with hem
      1. chain a [15802]
  4. Desulfovibrio desulfuricans [TaxId: 876] [46632] (1)
    1. 2dvh
      complexed with hec; mutant
      1. chain a [15803]
  5. Chlamydomonas reinhardtii [TaxId: 3055] [46633] (2)
    1. 1cyj
      complexed with cd, hem
      1. chain a [15805]
    2. 1cyi
      complexed with cd, hem
      1. chain a [15804]
  6. Cyanobacterium (Synechococcus elongatus) [TaxId: 32046] [46634] (1)
    1. 1c6s
      complexed with hec
      1. chain a [15806]
  7. Arthrospira maxima [TaxId: 129910] [63457] (2)
    1. 1f1f
      complexed with hem
      1. chain a [59571]
    2. 1kib
      complexed with hem
      1. chain a [72502]
      2. chain b [72503]
      3. chain c [72504]
      4. chain d [72505]
      5. chain e [72506]
      6. chain f [72507]
      7. chain g [72508]
      8. chain h [72509]
  8. Green alga (Scenedesmus obliquus) [TaxId: 3088] [46635] (2)
    1. 1c6r
      complexed with cd, hem
      1. chain a [15807]
    2. 1c6o
      complexed with hem
      1. chain a [15808]
      2. chain b [15809]
  9. Red alga (Porphyra yezoensis) [TaxId: 2788] [63458] (1)
    1. 1gdv
      complexed with hem
      1. chain a [60458]
  10. Green alga (Cladophora glomerata) [TaxId: 162068] [81674] (1)
    1. 1ls9
      complexed with hem
      1. chain a [78177]
2. Cytochrome c552 [46636]
  1. Thermus thermophilus [TaxId: 274] [46637] (6)
    SQ P04164
    1. 1c52
      complexed with hem
      1. chain a [15810]
    2. 1qyz
      complexed with hco
      1. chain a [104662]
    3. 1r0q
      complexed with hfm
      1. chain a [104755]
    4. 1dt1
      1. chain a [15811]
    5. 2fwl
      automatically matched to d1c52__
      complexed with cua, hec
      1. region a:3-131 [134247]
    6. 1foc
      Cytochrome c557: improperly folded c552
      complexed with hem
      1. chain a [15812]
      2. chain b [15813]
  2. Pseudomonas nautica [TaxId: 2743] [46638] (1)
    1. 1cno
      complexed with gol, hec
      1. chain a [15814]
      2. chain b [15815]
      3. chain c [15816]
      4. chain d [15817]
      5. chain e [15818]
      6. chain f [15819]
      7. chain g [15820]
      8. chain h [15821]
  3. Paracoccus denitrificans [TaxId: 266] [46639] (5)
    1. 1ql3
      1. chain a [15822]
      2. chain b [15823]
      3. chain c [15824]
      4. chain d [15825]
    2. 1ql4
      1. chain a [15826]
      2. chain b [15827]
      3. chain c [15828]
      4. chain d [15829]
    3. 1i6d
      complexed with hec
      1. chain a [66038]
    4. 1i6e
      complexed with hec
      1. chain a [66039]
    5. 1c7m
      complexed with hec
      1. chain a [15830]
  4. Hydrogenobacter thermophilus [TaxId: 940] [46640] (6)
    1. 1ynr
      automatically matched to d1ayg__
      complexed with hec, mpd, so4
      1. region a:1-80 [123750]
    2. 1ynr
      automatically matched to d1ayg__
      complexed with hec, mpd, so4
      1. region b:1-79 [123751]
    3. 1ynr
      automatically matched to d1ayg__
      complexed with hec, mpd, so4
      1. region c:1-80 [123752]
    4. 1ynr
      automatically matched to d1ayg__
      complexed with hec, mpd, so4
      1. region d:1-79 [123753]
    5. 2ai5
      automatically matched to d1ayg__
      complexed with hec
      1. region a:1-80 [126817]
    6. 1ayg
      complexed with hec
      1. chain a [15831]
  5. Nitrosomonas europaea [TaxId: 915] [46641] (2)
    1. 1a56
      complexed with hec
      1. chain a [15832]
    2. 1a8c
      complexed with hec
      1. chain a [15833]
3. Photosystem II associated cytochrome c549 [63459]
  1. Synechocystis sp., pcc 6803 [TaxId: 1143] [63460] (1)
    1. 1e29
      complexed with ca, hec
      1. chain a [59161]
  2. Arthrospira maxima [TaxId: 129910] [63461] (1)
    1. 1f1c
      complexed with hem
      1. chain a [59569]
      2. chain b [59570]
4. Cytochrome c550 [100991]
  1. Thermosynechococcus elongatus [TaxId: 146786] [100992] (2)
    1. 1mz4
      complexed with bct, gol, hem, po4
      1. chain a [91496]
    2. 2axt
      automatically matched to d1mz4a_
      complexed with bcr, bct, ca, cla, dgd, fe2, hem, lhg, lmt, mge, oec, pho, pq9, sqd
      1. region v:27-157 [127499]
5. Mitochondrial cytochrome c [46642]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [46643] (45)
    SQ P00044
    1. 1ycc
      complexed with hem, so4, tml
      1. chain a [15834]
    2. 1ytc
      complexed with hem, so4, tml; mutant
      1. chain a [15835]
    3. 1s6v
      complexed with hem, iod; mutant
      1. chain b [98610]
      2. chain d [98612]
    4. 2bcn
      automatically matched to d1u74b_
      complexed with hem, znh; mutant
      1. region b:1-108 [128300]
    5. 1cih
      complexed with hem, so4, tml; mutant
      1. chain a [15836]
    6. 1csu
      complexed with hem, so4, tml; mutant
      1. chain a [15837]
    7. 1cie
      complexed with hem, so4, tml; mutant
      1. chain a [15838]
    8. 1cig
      complexed with hem, so4, tml; mutant
      1. chain a [15840]
    9. 1csw
      complexed with hem, so4, tml; mutant
      1. chain a [15839]
    10. 1yeb
      complexed with hem, so4, tml
      1. chain a [15843]
    11. 1raq
      complexed with hem, so4, tml; mutant
      1. chain a [15844]
    12. 1csx
      complexed with hem, so4, tml; mutant
      1. chain a [15841]
    13. 1csv
      complexed with hem, so4, tml; mutant
      1. chain a [15850]
    14. 1crj
      complexed with hem, so4, tml; mutant
      1. chain a [15842]
    15. 1cri
      complexed with hem, so4, tml; mutant
      1. chain a [15847]
    16. 1chi
      complexed with hem, so4, tml; mutant
      1. chain a [15848]
    17. 1cif
      complexed with hem, so4, tml; mutant
      1. chain a [15846]
    18. 1chj
      complexed with hem, so4, tml; mutant
      1. chain a [15851]
    19. 1yea
      complexed with hem, so4, tml
      1. chain a [15845]
    20. 1chh
      complexed with hem, so4, tml; mutant
      1. chain a [15852]
    21. 1crh
      complexed with hem, so4, tml; mutant
      1. chain a [15849]
    22. 1irw
      complexed with hem, m3l, so4; mutant
      1. chain a [15855]
    23. 1crg
      complexed with hem, so4, tml; mutant
      1. chain a [15854]
    24. 1ctz
      complexed with hem, so4, tml; mutant
      1. chain a [15853]
    25. 2ycc
      complexed with hem, so4, tml; mutant
      1. chain a [15856]
    26. 2pcc
      complexed with hem, sul
      1. chain b [15860]
      2. chain d [15861]
    27. 1rap
      complexed with hem, so4, tml; mutant
      1. chain a [15858]
    28. 1cty
      complexed with hem, so4, tml; mutant
      1. chain a [15859]
    29. 2b11
      complexed with hem, znh; mutant
      1. region b:296-403 [144945]
    30. 2b11
      automatically matched to 2B11 B:296-403
      complexed with hem, znh; mutant
      1. region d:796-903 [144946]
    31. 1irv
      complexed with hem, m3l, so4; mutant
      1. chain a [15857]
    32. 1u74
      complexed with hem, po4, znh; mutant
      1. chain b [107705]
      2. chain d [107707]
    33. 1kyo
      complexed with fes, hem, m3l, sma
      1. chain w [73279]
    34. 2b10
      complexed with hem, znh
      1. region b:-4-103 [144943]
    35. 2b10
      automatically matched to 2B10 B:-4-103
      complexed with hem, znh
      1. region d:-4-103 [144944]
    36. 2b0z
      complexed with hem, znh; mutant
      1. region b:-4-103 [144942]
    37. 2b12
      complexed with hem, znh; mutant
      1. region b:-4-103 [144947]
    38. 1fhb
      complexed with cyn, hem, tml; mutant
      1. chain a [15862]
    39. 2hv4
      automatically matched to d1nmia_
      complexed with hec; mutant
      1. region a:-5-103 [136782]
    40. 2gb8
      automatically matched to d1kyow_
      complexed with hec, hem
      1. region b:1-103 [134910]
    41. 2orl
      automatically matched to d1nmia_
      complexed with 4nl, hec; mutant
      1. region a:-5-103 [139273]
    42. 1yic
      complexed with hec, m3l; mutant
      1. chain a [15863]
    43. 1yfc
      complexed with hec, m3l; mutant
      1. chain a [15864]
    44. 1nmi
      complexed with hec, imd
      1. chain a [80659]
    45. 1lms
      complexed with hec; mutant
      1. chain a [84633]
  2. Horse (Equus caballus) [TaxId: 9796] [46644] (16)
    SQ P00004
    1. 1wej
      complexed with ace, hem, zn
      1. chain f [15865]
    2. 1hrc
      complexed with hem
      1. chain a [15866]
    3. 1crc
      complexed with hem
      1. chain a [15867]
      2. chain b [15868]
    4. 1u75
      complexed with hem, po4, znh
      1. chain b [107709]
    5. 2pcb
      complexed with hem
      1. chain b [15869]
    6. 1m60
      zinc-substituted
      complexed with hes
      1. chain a [74519]
    7. 1i5t
      complexed with cn, hec
      1. chain a [61823]
    8. 1fi9
      imidazole complex
      complexed with hec, imd
      1. chain a [15870]
    9. 1lc2
      complexed with hec
      1. chain a [84579]
    10. 1lc1
      complexed with hec
      1. chain a [84578]
    11. 1giw
      complexed with hec
      1. chain a [15874]
    12. 2giw
      complexed with hec
      1. chain a [15875]
    13. 1akk
      complexed with hec
      1. chain a [15873]
    14. 1fi7
      imidazole complex
      complexed with hec, imd
      1. chain a [15872]
    15. 2frc
      complexed with hec
      1. chain a [15876]
    16. 1ocd
      complexed with hec
      1. chain a [15871]
  3. Rice embryos (Oryza sativa) [TaxId: 4530] [46645] (1)
    1. 1ccr
      complexed with hem, tml
      1. chain a [15877]
  4. Bluefin tuna (Thunnus thynnus) [TaxId: 8237] [46646] (5)
    identical sequence to Thunnus alalunga, TaxId: 8235
    1. 1lfm
      complexed with coh
      1. chain a [73883]
      2. chain b [73884]
    2. 5cyt
      complexed with hem
      1. chain r [15878]
    3. 1i54
      complexed with hem, znh
      1. chain a [61768]
      2. chain b [61769]
    4. 1i55
      complexed with hem, znh
      1. chain a [61770]
      2. chain b [61771]
    5. 3cyt
      complexed with hem
      1. chain o [15879]
      2. chain i [15880]
  5. Bonito (Katsuwonus pelamis) [TaxId: 8226] [46647] (2)
    1. 1cyc
      complexed with hem
      1. chain a [15881]
    2. 1cyc
      duplicate of 1CYC
      complexed with hem
      1. chain b [118450]
  6. Human (Homo sapiens) [TaxId: 9606] [109644] (1)
    SQ P99999
    1. 1j3s
      complexed with hec
      1. chain a [103838]
6. Cytochrome ch [46648]
  1. Methylobacterium extorquens [TaxId: 408] [46649] (1)
    1. 1qn2
      complexed with hec
      1. chain a [15882]
      2. chain b [15883]
      3. chain c [15884]
7. Cytochrome c2 [46650]
  1. Rhodospirillum rubrum [TaxId: 1085] [46651] (2)
    1. 3c2c
      complexed with hem
      1. chain a [15885]
    2. 2c2c
      complexed with hem
      1. chain a [15886]
  2. Rhodobacter capsulatus [TaxId: 1061] [46652] (3)
    SQ P00094
    1. 1vyd
      complexed with hem; mutant
      1. chain a [108900]
      2. chain b [108901]
    2. 1c2r
      complexed with hem
      1. chain a [15887]
      2. chain b [15888]
    3. 1c2n
      complexed with hec
      1. chain a [15889]
  3. Rhodobacter sphaeroides [TaxId: 1063] [46653] (5)
    1. 1cxc
      complexed with hem
      1. chain a [15890]
    2. 2cxb
      complexed with hem
      1. chain a [15891]
      2. chain b [15892]
    3. 1cxa
      complexed with hem, imd
      1. chain a [15893]
    4. 1l9b
      complexed with bcl, bph, cl, fe2, hem, hto, lda, na, u10
      1. chain c [73711]
    5. 1l9j
      complexed with bcl, bph, cl, fe2, hem, lda, u10
      1. chain c [73722]
      2. chain d [73723]
  4. Rhodopseudomonas viridis [TaxId: 1079] [46654] (3)
    1. 1co6
      complexed with hem
      1. chain a [15894]
    2. 1io3
      complexed with hem
      1. chain a [62613]
    3. 1cry
      complexed with hem
      1. chain a [15895]
  5. Rhodopseudomonas palustris [TaxId: 1076] [46655] (4)
    1. 1i8o
      complexed with hec, nh3, sul
      1. chain a [61979]
    2. 1hh7
      complexed with hec, nh3, so4
      1. chain a [15896]
    3. 1fj0
      complexed with gol, hem, so4
      1. chain a [65011]
      2. chain b [65012]
      3. chain c [65013]
      4. chain d [65014]
    4. 1i8p
      complexed with hec
      1. chain a [61980]
      2. chain b [61981]
      3. chain c [61982]
      4. chain d [61983]
  6. Rhodopila globiformis [TaxId: 1071] [46656] (1)
    1. 1hro
      complexed with hem
      1. chain a [15897]
      2. chain b [15898]
  7. Paracoccus denitrificans [TaxId: 266] [46657] (2)
    1. 1cot
      complexed with hem
      1. chain a [15899]
    2. 155c
      complexed with hem
      1. chain a [15900]
  8. Rhodospirillum centenum [TaxId: 34018] [68947] (1)
    1. 1jdl
      complexed with hem
      1. chain a [66557]
8. Mono-heme c-type cytochrome SoxX [81675]
  1. Rhodovulum sulfidophilum [TaxId: 35806] [81676] (7)
    1. 1h32
      complexed with css, edo, hec
      1. chain b [76620]
    2. 1h33
      complexed with css, hec
      1. chain b [76623]
    3. 2oz1
      automatically matched to d1h31b_
      complexed with hec
      1. region b:1-137 [149087]
    4. 2oz1
      automatically matched to d1h31b_
      complexed with hec
      1. region d:1-137 [149090]
    5. 2oz1
      automatically matched to d1h31b_
      complexed with hec
      1. region f:1-137 [149093]
    6. 2oz1
      automatically matched to d1h31b_
      complexed with hec
      1. region h:1-137 [149096]
    7. 1h31
      complexed with css, hec
      1. chain b [76608]
      2. chain d [76611]
      3. chain f [76614]
      4. chain h [76617]
9. Cytochrome c5 [46658]
  1. Azotobacter vinelandii [TaxId: 354] [46659] (1)
    1. 1cc5
      complexed with hem
      1. chain a [15901]
10. Mono-heme c-type cytochrome ScyA [68948]
  1. Shewanella putrefaciens [TaxId: 24] [68949] (2)
    1. 1kx7
      complexed with hec
      1. chain a [68880]
    2. 1kx2
      complexed with hec
      1. chain a [68878]
11. Cytochrome c551 [46660]
  1. Pseudomonas stutzeri [TaxId: 316] [46661] (3)
    1. 1fi3
      complexed with hec; mutant
      1. chain a [59846]
    2. 1cor
      complexed with hem
      1. chain a [15903]
    3. 1cch
      complexed with hem
      1. chain a [15902]
  2. Pseudomonas aeruginosa [TaxId: 287] [46662] (4)
    1. 451c
      complexed with hem
      1. chain a [15904]
    2. 351c
      complexed with hem
      1. chain a [15905]
    3. 1dvv
      complexed with hem; mutant
      1. chain a [15906]
    4. 2pac
      complexed with hem
      1. chain a [15907]
  3. Paracoccus denitrificans [TaxId: 266] [46663] (11)
    1. 2gc7
      automatically matched to d1mg2d_
      complexed with hem, na, trq
      1. region d:1-147 [134957]
    2. 2gc7
      automatically matched to d1mg2d_
      complexed with hem, na, trq
      1. region h:1-147 [134961]
    3. 2gc7
      automatically matched to d1mg2d_
      complexed with hem, na, trq
      1. region l:1-147 [134965]
    4. 2gc7
      automatically matched to d1mg2d_
      complexed with hem, na, trq
      1. region p:1-147 [134969]
    5. 2gc4
      automatically matched to d1mg2d_
      complexed with cu, hem, na, trq
      1. region d:1-147 [134937]
    6. 2gc4
      automatically matched to d1mg2d_
      complexed with cu, hem, na, trq
      1. region h:1-147 [134941]
    7. 2gc4
      automatically matched to d1mg2d_
      complexed with cu, hem, na, trq
      1. region l:1-147 [134945]
    8. 2gc4
      automatically matched to d1mg2d_
      complexed with cu, hem, na, trq
      1. region p:1-147 [134949]
    9. 1mg2
      complexed with cu, hem, na, po4, trq; mutant
      1. chain d [79062]
      2. chain h [79066]
      3. chain l [79070]
      4. chain p [79074]
    10. 1mg3
      complexed with cu, hem, na, po4, trw; mutant
      1. chain d [79078]
      2. chain h [79082]
      3. chain l [79086]
      4. chain p [79090]
    11. 2mta
      complexed with cu, hem, owq, po4
      1. chain c [15908]
  4. Ectothiorhodospira halophila [TaxId: 1053] [46664] (1)
    1. 1gks
      complexed with hem
      1. chain a [15909]
12. SHP, an oxygen binding cytochrome c [46667]
  1. Rhodobacter sphaeroides [TaxId: 1063] [46668] (4)
    1. 1dw0
      complexed with hem, so4
      1. chain a [15911]
      2. chain b [15912]
      3. chain c [15913]
    2. 1dw1
      complexed with cyn, hem
      1. chain a [15914]
      2. chain b [15915]
      3. chain c [15916]
    3. 1dw3
      complexed with hem
      1. chain a [15917]
      2. chain b [15918]
      3. chain c [15919]
    4. 1dw2
      complexed with hem, no
      1. chain a [15920]
      2. chain b [15921]
      3. chain c [15922]
13. Cytochrome c'' [68950]
  close homologue of SHP
  1. Methylophilus methylotrophus, strain w3a1 [TaxId: 17] [68951] (3)
    1. 1gu2
      complexed with hec
      1. chain a [76348]
      2. chain b [76349]
    2. 1oae
      complexed with gol, hec, so4
      1. chain a [92704]
      2. chain b [92705]
    3. 1e8e
      complexed with hec
      1. chain a [64795]
14. p-Cresol methylhydroxylase, cytochrome c subunit [46669]
  the other subunit is a flavoprotein
  1. Pseudomonas putida [TaxId: 303] [46670] (4)
    1. 1wve
      automatically matched to d1diqc_
      complexed with acy, cl, fad, hem, trs
      1. region c:602-675 [121335]
    2. 1wve
      automatically matched to d1diqc_
      complexed with acy, cl, fad, hem, trs
      1. region d:602-675 [121336]
    3. 1diq
      1. chain c [15923]
      2. chain d [15924]
    4. 1dii
      1. chain c [15925]
      2. chain d [15926]
15. Cytochrome c-L (MoxG) [109645]
  1. Methylobacterium extorquens [TaxId: 408] [109646] (1)
    SQ P14774 49-197
    1. 2c8s
      automatically matched to d1umma_
      complexed with ca, hem
      1. region a:24-172 [130123]
N-terminal (heme c) domain of cytochrome cd1-nitrite reductase [46671] (3)
1. N-terminal (heme c) domain of cytochrome cd1-nitrite reductase [46672]
  the C-terminal domain is a 8-bladed beta-propeller
  1. Paracoccus pantotrophus [TaxId: 82367] [46673] (11)
    formerly Thiosphaera pantotropha
    1. 1gq1
      complexed with dhe, gol, hec, so4; mutant
      1. region a:9-133 [76264]
      2. region b:9-133 [76266]
    2. 1hj5
      complexed with dhe, gol, hec, so4
      1. region a:9-133 [15927]
      2. region b:9-133 [15928]
    3. 1dy7
      complexed with cmo, dhe, gol, hec, so4
      1. region b:32-135 [15929]
    4. 1hj3
      complexed with dhe, gol, hec, oxy, so4
      1. region a:17-133 [15930]
      2. region b:26-133 [15931]
    5. 1hj4
      complexed with dhe, gol, hec, so4
      1. region a:17-133 [15932]
      2. region b:26-133 [15933]
    6. 1aoq
      complexed with 2no, dhe, hem, no
      1. region a:17-133 [15934]
      2. region b:9-133 [15935]
    7. 1aom
      complexed with 2no, dhe, hem, no
      1. region b:9-133 [15936]
    8. 1aof
      complexed with dhe, hem, so2
      1. region a:36-133 [15937]
      2. region b:26-133 [15938]
    9. 1h9x
      complexed with dhe, hec, nhe, so4
      1. region a:42-133 [60855]
      2. region b:39-133 [60857]
    10. 1hcm
      complexed with dhe, hec, so4
      1. region a:42-133 [60958]
      2. region b:39-133 [60960]
    11. 1h9y
      complexed with cn, dhe, hec, so4
      1. region a:48-133 [60859]
      2. region b:49-133 [60861]
  2. Pseudomonas aeruginosa [TaxId: 287] [46674] (9)
    1. 1nir
      complexed with cl, dhe, hec, oh, po4
      1. region a:6-117 [15939]
      2. region b:5-117 [15940]
    2. 1gjq
      complexed with cn, dhe, hec
      1. region a:3-117 [70193]
      2. region b:5-117 [70195]
    3. 1hzu
      complexed with dhe, hec; mutant
      1. region a:23-117 [61460]
    4. 1nno
      complexed with dhe, hec, nmo
      1. region a:5-117 [15941]
      2. region b:5-117 [15942]
    5. 1n90
      complexed with dhe, hec
      1. region a:6-117 [15945]
      2. region b:5-117 [15946]
    6. 1n15
      complexed with dhe, hec
      1. region a:6-117 [15943]
      2. region b:5-117 [15944]
    7. 1n50
      complexed with dhe, hec
      1. region a:6-117 [15949]
      2. region b:5-117 [15950]
    8. 1bl9
      complexed with dhe, hec, oh
      1. region a:7-117 [15947]
      2. region b:7-117 [15948]
    9. 1hzv
      complexed with dhe, hec, no; mutant
      1. region a:23-117 [61462]
  3. Paracoccus denitrificans [TaxId: 266] [46675] (2)
    1. 1qks
      complexed with dhe, gol, hec, so4
      1. region a:9-135 [15951]
      2. region b:9-135 [15952]
    2. 1e2r
      complexed with cn, dhe, gol, hec
      1. region a:36-135 [15953]
      2. region b:25-135 [15954]
Quinoprotein alcohol dehydrogenase, C-terminal domain [68952] (2)
1. Quinoprotein alcohol dehydrogenase, C-terminal domain [68953]
  1. Comamonas testosteroni [TaxId: 285] [68954] (1)
    1. 1kb0
      complexed with ca, gol, hec, pqq, tfb
      1. region a:579-675 [68378]
  2. Pseudomonas putida, hk5 [TaxId: 303] [74669] (1)
    1. 1kv9
      complexed with acn, ca, epe, gol, hem, pqq
      1. region a:561-664 [73056]
Cytochrome bc1 domain [46676] (3)
1. Cytochrome bc1 domain [46677]
  1. Cow (Bos taurus) [TaxId: 9913] [46678] (19)
    SQ P00125
    1. 1ppj
      complexed with any, azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma
      1. region d:1-195 [104258]
      2. region q:1-195 [104273]
    2. 2a06
      automatically matched to d1be3d2
      complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, unl, uq
      1. region d:1-195 [125923]
    3. 2a06
      automatically matched to d1be3d2
      complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, unl, uq
      1. region q:1-195 [125932]
    4. 1pp9
      complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, uq
      1. region d:1-195 [104228]
      2. region q:1-195 [104243]
    5. 2fyu
      automatically matched to d1be3d2
      complexed with fdn, fes, hem
      1. region d:1-195 [134398]
    6. 1ntm
      complexed with fes, hem
      1. region d:1-195 [92127]
    7. 1ntz
      complexed with fes, hem, uq2
      1. region d:1-195 [92155]
    8. 1l0l
      complexed with fes, fmx, hem
      1. region d:1-195 [84488]
    9. 1sqx
      automatically matched to d1be3d2
      complexed with fes, hem, sma, uq2
      1. region d:1-195 [119041]
    10. 1ntk
      complexed with ay1, fes, hem
      1. region d:1-195 [92111]
    11. 1l0n
      complexed with fes, hem
      1. region d:1-195 [84504]
    12. 1sqb
      complexed with azo, fes, hem
      1. region d:1-195 [105896]
    13. 1sqv
      automatically matched to d1be3d2
      complexed with fes, hem, uhd, uq2
      1. region d:1-195 [119026]
    14. 1sqp
      automatically matched to d1be3d2
      complexed with cdl, fes, hem, myx, pee, plx
      1. region d:1-195 [119001]
    15. 1sqq
      automatically matched to d1be3d2
      complexed with fes, hem, ost, uq2
      1. region d:1-195 [119013]
    16. 1nu1
      complexed with fes, hem, qno
      1. region d:1-195 [92173]
    17. 1be3
      complexed with fes, hec, hem
      1. region d:1-195 [15955]
    18. 1bgy
      complexed with fes, hec, hem
      1. region d:1-195 [15957]
      2. region p:1-195 [15958]
    19. 1qcr
      disordered domain
      complexed with hem
      1. region d:167-195 [15956]
  2. Chicken (Gallus gallus) [TaxId: 9031] [46679] (3)
    1. 1bcc
      complexed with bog, fes, hem, pee, u10
      1. region d:1-195 [15959]
    2. 2bcc
      complexed with bog, fes, hem, pee, sig, u10
      1. region d:1-195 [15960]
    3. 3bcc
      complexed with amy, fes, hem, sig
      1. region d:1-195 [15961]
  3. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [63462] (9)
    1. 3cx5
      automatically matched to d1ezvd1
      complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, m3l, sma, suc, umq
      1. region d:62-260 [157082]
    2. 3cx5
      automatically matched to d1ezvd1
      complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, m3l, sma, suc, umq
      1. region o:62-260 [157098]
    3. 1kb9
      complexed with cdl, fes, hem, pcf, pef, pie, sma, umq, uq6
      1. region d:62-260 [77317]
    4. 2ibz
      automatically matched to d1ezvd1
      complexed with fes, hem, sma, uq6
      1. region d:62-260 [137221]
    5. 1ezv
      complexed with fes, hem, sma, uq6
      1. region d:62-260 [59546]
    6. 3cxh
      automatically matched to d1ezvd1
      complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, m3l, sma, suc, umq
      1. region d:62-260 [157115]
    7. 3cxh
      automatically matched to d1ezvd1
      complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, m3l, sma, suc, umq
      1. region o:62-260 [157131]
    8. 1p84
      complexed with 3pe, 3ph, cdl, dbt, fes, hem, pc1, umq, uq6
      1. region d:62-260 [87856]
    9. 1kyo
      complexed with fes, hem, m3l, sma
      1. region d:62-260 [73254]
      2. region o:62-260 [73269]
Two-domain cytochrome c [46680] (3)
duplication: consists of two cytochrome c type domains
1. Cytochrome c4 [46681]
  1. Pseudomonas stutzeri [TaxId: 316] [46682] (3)
    1. 1m70
      complexed with cry, hec
      1. region a:1-92 [91200]
      2. region a:93-190 [91201]
      3. region b:1-92 [91202]
      4. region b:93-190 [91203]
      5. region c:1-92 [91204]
      6. region c:93-190 [91205]
      7. region d:1-92 [91206]
      8. region d:93-190 [91207]
    2. 1m6z
      complexed with cry, hec, tmn
      1. region a:1-92 [91192]
      2. region a:93-190 [91193]
      3. region b:1-92 [91194]
      4. region b:93-190 [91195]
      5. region c:1-92 [91196]
      6. region c:93-190 [91197]
      7. region d:1-92 [91198]
      8. region d:93-190 [91199]
    3. 1etp
      complexed with hem
      1. region a:1-92 [15962]
      2. region a:93-190 [15963]
      3. region b:1-92 [15964]
      4. region b:93-190 [15965]
  2. Thiobacillus ferrooxidans [TaxId: 920] [88972] (1)
    1. 1h1o
      complexed with gol, hem, so4, zn
      1. region a:12-93 [83454]
      2. region a:94-183 [83455]
      3. region b:213-293 [83456]
      4. region b:294-383 [83457]
2. Flavocytochrome c sulfide dehydrogenase, FCSD, cytochrome subunit [46683]
  1. Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049] [46684] (1)
    1. 1fcd
      complexed with fad, hem
      1. region c:1-80 [15966]
      2. region c:81-174 [15967]
      3. region d:1-80 [15968]
      4. region d:81-174 [15969]
Di-heme cytochrome c SoxA [81677] (1)
two-domain cytochrome c with novel domain arrangement
1. Di-heme cytochrome c SoxA [81678]
  cysteine persulfide(cys sulfane) heme coordination
  1. Rhodovulum sulfidophilum [TaxId: 35806] [81679] (11)
    1. 1h32
      complexed with css, edo, hec
      1. region a:1-150 [76618]
      2. region a:151-261 [76619]
    2. 1h33
      complexed with css, hec
      1. region a:1-150 [76621]
      2. region a:151-261 [76622]
    3. 2oz1
      automatically matched to d1h31a1
      complexed with hec
      1. region a:1-150 [149085]
    4. 2oz1
      automatically matched to d1h31a2
      complexed with hec
      1. region a:151-261 [149086]
    5. 2oz1
      automatically matched to d1h31a1
      complexed with hec
      1. region c:1-150 [149088]
    6. 2oz1
      automatically matched to d1h31a2
      complexed with hec
      1. region c:151-261 [149089]
    7. 2oz1
      automatically matched to d1h31a1
      complexed with hec
      1. region e:1-150 [149091]
    8. 2oz1
      automatically matched to d1h31a2
      complexed with hec
      1. region e:151-261 [149092]
    9. 2oz1
      automatically matched to d1h31a1
      complexed with hec
      1. region g:1-150 [149094]
    10. 2oz1
      automatically matched to d1h31a2
      complexed with hec
      1. region g:151-261 [149095]
    11. 1h31
      complexed with css, hec
      1. region a:1-150 [76606]
      2. region a:151-261 [76607]
      3. region c:1-150 [76609]
      4. region c:151-261 [76610]
      5. region e:1-150 [76612]
      6. region e:151-261 [76613]
      7. region g:1-150 [76615]
      8. region g:151-261 [76616]
Di-heme cytochrome c peroxidase [46685] (3)
duplication: contains two cytochrome c-type domains
1. Di-heme cytochrome c peroxidase [46686]
  1. Pseudomonas aeruginosa [TaxId: 287] [46687] (5)
    1. 1eb7
      complexed with ca, hec
      1. region a:1-164 [59404]
      2. region a:165-323 [59405]
    2. 2vhd
      automatically matched to d1eb7a1
      complexed with ca, hec
      1. region a:1-164 [153050]
    3. 2vhd
      automatically matched to d1eb7a2
      complexed with ca, hec
      1. region a:165-323 [153051]
    4. 2vhd
      automatically matched to d1eb7a1
      complexed with ca, hec
      1. region b:1-164 [153052]
    5. 2vhd
      automatically matched to d1eb7a2
      complexed with ca, hec
      1. region b:165-323 [153053]
  2. Pseudomonas nautica [TaxId: 2743] [100993] (3)
    SQ P83787
    1. 1nml
      complexed with cit, hem
      1. region a:1-166 [91976]
      2. region a:167-326 [91977]
    2. 1rz6
      complexed with cit, hem
      1. region a:1-166 [105135]
      2. region a:167-322 [105136]
    3. 1rz5
      complexed with ca, hem
      1. region a:1-166 [105133]
      2. region a:167-326 [105134]
  3. Nitrosomonas europaea [TaxId: 915] [68955] (1)
    1. 1iqc
      complexed with ca, gol, hem, mg
      1. region a:1-150 [66266]
      2. region a:151-308 [66267]
      3. region b:1-150 [66268]
      4. region b:151-308 [66269]
      5. region c:1-150 [66270]
      6. region c:151-308 [66271]
      7. region d:1-150 [66272]
      8. region d:151-308 [66273]
Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 [68956] (2)
1. Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 [68957]
  duplication: tandem repeat of two cytochrome c-like domains
  1. Paracoccus denitrificans [TaxId: 266] [68958] (2)
    1. 1pby
      complexed with hem, tbu, trw
      1. region a:1-85 [94417]
      2. region a:86-165 [94418]
    2. 1jju
      complexed with hem, na, tbu, trq
      1. region a:1-85 [66774]
      2. region a:86-165 [66775]
  2. Pseudomonas putida [TaxId: 303] [68959] (2)
    1. 1jmx
      complexed with hec, ni, trq
      1. region a:2-85 [66901]
      2. region a:86-162 [66902]
    2. 1jmz
      complexed with hec, ni, pnd, trq
      1. region a:2-85 [66908]
      2. region a:86-162 [66909]