Structural Classification of Proteins
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Protein: Methionyl-tRNA synthetase (MetRS), Zn-domain from Pyrococcus abyssi [TaxId: 29292]

SQ Q9V011 1-606; C-domain 616-722 is solved separately: 1MKH

Lineage:

  1. Root: scop
  2. Class: Small proteins [56992]
    Usually dominated by metal ligand, heme, and/or disulfide bridges
  3. Fold: Rubredoxin-like [57769]
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. Superfamily: Methionyl-tRNA synthetase (MetRS), Zn-domain [57770]
    link to SUPERFAMILY database - Superfamily
  5. Family: Methionyl-tRNA synthetase (MetRS), Zn-domain [57771]
    in the Pyrococcus abyssi MetRS structure there is a tandem repeat of two such domains swapped with their zinc-binding 'knuckles', this duplicated finger occupies a larger region (124-183) than defined below; there is a structurally equivalent region in the E. coli enzyme lacking the second zinc-binding site
  6. Protein: Methionyl-tRNA synthetase (MetRS), Zn-domain [57772]
  7. Species: Pyrococcus abyssi [TaxId: 29292] [111451]
    SQ Q9V011 1-606; C-domain 616-722 is solved separately: 1MKH

PDB Entry Domains:

  1. 1rqg picpicxrefxref
    complexed with zn
    1. region a:139-173 [105065] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk