Fold: Rubredoxin-like

metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2

Lineage:

1. Root: scop
2. Class: Small proteins [56992]
   Usually dominated by metal ligand, heme, and/or disulfide bridges
3. Fold: Rubredoxin-like [57769]
   metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2

Superfamilies:

1. Methionyl-tRNA synthetase (MetRS), Zn-domain [57770] (1)
   uperfamily
2. Microbial and mitochondrial ADK, insert "zinc finger" domain [57774] (1)
   uperfamily
3. NADH pyrophosphatase intervening domain [116738] (1)
   uperfamily
4. Zinc beta-ribbon [57783] (5)
   uperfamily
5. Casein kinase II beta subunit [57798] (1)
   uperfamily
6. Rubredoxin-like [57802] (3)
   uperfamily
7. Zn-finger domain of Sec23/24 [82919] (1)
   uperfamily
8. Ran binding protein zinc finger-like [90209] (1)
   contains CxxxxC-x(n)-CxxC zinc-binding site; similar to the Sec23/24 zinc finger domain
   uperfamily
9. Hypothetical protein Ta0289 C-terminal domain [103623] (1)
   contains CxxC-x(n)-CxxxxC zinc-binding site; sequence similarity to NAD-dependent DNA ligase zinc-finger subdomain
   uperfamily
10. Hypothetical protein MTH1184 [57821] (1)
    contains two CXC motifs
    uperfamily
11. Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain [57825] (1)
    uperfamily
12. Zn-binding ribosomal proteins [57829] (8)
    uperfamily
13. RNA polymerase subunits [63393] (2)
    uperfamily
14. NOB1 zinc finger-like [144206] (1)
    uperfamily
15. Nop10-like SnoRNP [144210] (1)
    uperfamily
16. CSL zinc finger [144217] (1)
    uperfamily
17. YfgJ-like [161187] (1)
    duplication: consists of two rubredoxin-like (sub)domains, interlocked together

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk