Structural Classification of Proteins

Superfamily: Ribosomal protein L16p/L10e

: uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a+b) [53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold: alpha/beta-Hammerhead [54664]
core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids
Superfamily: Ribosomal protein L16p/L10e [54686]
uperfamily

Families:

Ribosomal protein L10e [54687] (2)
1. Ribosomal protein L10e [54688]
  1. Archaeon Haloarcula marismortui [TaxId: 2238] [54689] (58)
    SQ P60617
    1. 1vqo
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3
      1. region h:1-163 [120369]
    2. 3cc2
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
      1. region h:4-166 [156177]
    3. 1vq8
      automatically matched to d1s72h_
      complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
      1. region h:1-163 [120195]
    4. 1vqp
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, dcz, hfa, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
      1. region h:1-163 [120398]
    5. 1jj2
      complexed with cd, cl, k, mg, na
      1. chain h [63093]
    6. 1yhq
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3, zit; mutant
      1. region h:4-166 [123190]
    7. 1vql
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, tse, ur3
      1. region h:1-163 [120282]
    8. 1vqk
      automatically matched to d1s72h_
      complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
      1. region h:1-163 [120253]
    9. 1s72
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
      1. chain h [105327]
    10. 1vqm
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
      1. region h:1-163 [120311]
    11. 3ccm
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region h:4-166 [156338]
    12. 1vqn
      automatically matched to d1s72h_
      complexed with 1ma, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, ppu, psu, sr, ur3
      1. region h:1-163 [120340]
    13. 3cc7
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region h:4-166 [156226]
    14. 1yi2
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, ery, k, mg, na, omg, omu, psu, ur3; mutant
      1. region h:4-166 [123237]
    15. 1yij
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, tel, ur3; mutant
      1. region h:4-166 [123305]
    16. 3ccu
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region h:4-166 [156434]
    17. 1vq7
      automatically matched to d1s72h_
      complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, pae, psu, ur3
      1. region h:1-163 [120166]
    18. 3cce
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region h:4-166 [156266]
    19. 3ccl
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region h:4-166 [156314]
    20. 1vq4
      automatically matched to d1s72h_
      complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, po2, psu, ur3
      1. region h:1-163 [120079]
    21. 2otl
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, gir, k, mg, na, omg, omu, psu, ur3
      1. region h:1-171 [139353]
    22. 1vq5
      automatically matched to d1s72h_
      complexed with 1ma, 2op, 5aa, cd, cl, dcz, k, mg, na, omg, omu, po2, psu, ur3
      1. region h:1-163 [120108]
    23. 1vq9
      automatically matched to d1s72h_
      complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
      1. region h:1-163 [120224]
    24. 3ccv
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region h:4-166 [156458]
    25. 3cpw
      automatically matched to d1s72h_
      complexed with ace, cd, cl, k, mg, na, sr, zld; mutant
      1. region h:1-163 [156909]
    26. 1m90
      complexed with aca, cd, cl, k, mg, na, pha, sps
      1. chain j [78848]
    27. 1yit
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3, vir, vrs
      1. region h:4-166 [123348]
    28. 1vq6
      automatically matched to d1s72h_
      complexed with 1ma, 5aa, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, psu, ur3
      1. region h:1-163 [120137]
    29. 3cc4
      automatically matched to d1s72h_
      complexed with 1ma, anm, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
      1. region h:4-166 [156202]
    30. 3ccq
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region h:4-166 [156362]
    31. 3cd6
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3; mutant
      1. region h:4-166 [156482]
    32. 2otj
      automatically matched to d1s72h_
      complexed with 13t, 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
      1. region h:1-171 [139324]
    33. 3ccs
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region h:4-166 [156410]
    34. 3cma
      automatically matched to d1s72h_
      complexed with 1ma, 8an, aca, cd, cl, k, mg, na, omg, omu, phe, psu, sr, ur3
      1. region h:4-166 [156778]
    35. 1yjw
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, syb, ur3; mutant
      1. region h:4-166 [123472]
    36. 1nji
      complexed with cd, cl, clm, k, mg, na; mutant
      1. chain j [85801]
    37. 2qex
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, neg, omg, omu, psu, ur3
      1. region h:1-163 [150696]
    38. 3ccr
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region h:4-166 [156386]
    39. 1kqs
      complexed with aca, btn, cd, cl, k, mg, na, pha, ppu
      1. chain h [68823]
    40. 3ccj
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region h:4-166 [156290]
    41. 1kc8
      complexed with bls, cd, cl, k, mg, na
      1. chain j [84365]
    42. 1yjn
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, cly, k, mg, na, omg, omu, psu, ur3; mutant
      1. region h:4-166 [123440]
    43. 1n8r
      complexed with cd, cl, k, mg, na, vir; mutant
      1. chain j [85437]
    44. 1k73
      complexed with anm, cd, cl, k, mg, na
      1. chain j [84326]
    45. 1yj9
      automatically matched to d1s72h_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3; mutant
      1. region h:4-166 [123401]
    46. 1qvg
      complexed with cd, cl, k, mg, na
      1. chain h [96400]
    47. 1q82
      complexed with cd, cl, k, mg, na, ppu
      1. chain j [96137]
    48. 1qvf
      complexed with cd, cl, k, mg, na
      1. chain h [96370]
    49. 1q81
      complexed with cd, cl, k, mg, na, ppu
      1. chain j [96107]
    50. 1k9m
      complexed with cd, cl, k, mg, na, tyk
      1. chain j [72221]
    51. 1kd1
      complexed with cd, cl, k, mg, na, spr
      1. chain j [72332]
    52. 1k8a
      complexed with cai, cd, cl, k, mg, na
      1. chain j [72154]
    53. 1m1k
      complexed with cd, cl, k, mg, na, zit
      1. chain j [74392]
    54. 3cme
      automatically matched to d1s72h_
      complexed with 1ma, 8an, aca, cd, cl, k, mg, na, omg, omu, phe, psu, sr, ur3
      1. region h:4-166 [156815]
    55. 1q86
      complexed with cd, cl, k, mg, na, pha
      1. chain j [96175]
    56. 2qa4
      automatically matched to d1s72h_
      complexed with cd, cl, k, mg, na, omg, omu, psu, ur3
      1. region h:1-163 [150181]
    57. 1q7y
      complexed with cd, cl, k, mg, na, po4, puy
      1. chain j [96073]
    58. 1ffk
      complexed with cd, k, mo3; mutant
      1. chain f [38628]
  2. Human (Homo sapiens) [TaxId: 9606] [160195] (2)
    SQ P27635 40-176
    1. 2pa2
      core domain only
      complexed with k
      1. region a:40-176 [149337]
    2. 2pa2
      automatically matched to 2PA2 A:40-176
      complexed with k
      1. region b:40-176 [149338]
Ribosomal protein L16p [117888] (4)
Pfam 00252
1. Ribosomal protein L16p [117889]
  1. Thermotoga maritima [TaxId: 2336] [117890] (1)
    SQ P60489
    1. 1wki
      Structural genomics target
      1. chain a [114725]
  2. Escherichia coli [TaxId: 562] [143200] (29)
    SQ P0ADY7 1-136
    1. 2gyc
      automatically matched to 2AW4 M:1-136
      1. region k:3-133 [135851]
    2. 2gya
      automatically matched to 2AW4 M:1-136
      1. region k:3-133 [135839]
    3. 2qam
      automatically matched to d1vs6m1
      complexed with mg, nmy, zn
      1. region m:1-136 [150253]
    4. 2qao
      automatically matched to d1vs6m1
      complexed with mg, nmy, zn
      1. region m:1-136 [150306]
    5. 2i2t
      automatically matched to 2AW4 M:1-136
      complexed with mg, zn
      1. region m:1-136 [137000]
    6. 2i2v
      automatically matched to 2AW4 M:1-136
      complexed with mg, zn
      1. region m:1-136 [137013]
    7. 2qbe
      automatically matched to d1vs6m1
      complexed with mg, zn
      1. region m:1-136 [150473]
    8. 2qbg
      automatically matched to d1vs6m1
      complexed with mg, zn
      1. region m:1-136 [150527]
    9. 2qoz
      automatically matched to d1vs6m1
      complexed with mg, nmy, zn
      1. region m:1-136 [151129]
    10. 2qp1
      automatically matched to d1vs6m1
      complexed with mg, nmy, zn
      1. region m:1-136 [151182]
    11. 3df2
      automatically matched to d1vs6m1
      complexed with mg, zn
      1. region m:1-136 [157642]
    12. 3df4
      automatically matched to d1vs6m1
      complexed with mg, zn
      1. region m:1-136 [157696]
    13. 2qba
      automatically matched to d1vs6m1
      complexed with lll, mg, zn
      1. region m:1-136 [150366]
    14. 2qbc
      automatically matched to d1vs6m1
      complexed with lll, mg, zn
      1. region m:1-136 [150419]
    15. 2qbi
      automatically matched to d1vs6m1
      complexed with lll, mg, zn
      1. region m:1-136 [150581]
    16. 2qbk
      automatically matched to d1vs6m1
      complexed with lll, mg, zn
      1. region m:1-136 [150635]
    17. 2qov
      automatically matched to d1vs6m1
      complexed with mg, zn
      1. region m:1-136 [151023]
    18. 2qox
      automatically matched to d1vs6m1
      complexed with mg, zn
      1. region m:1-136 [151076]
    19. 1vs6
      automatically matched to 2AW4 M:1-136
      complexed with mg
      1. region m:1-136 [120496]
    20. 1vs8
      automatically matched to 2AW4 M:1-136
      complexed with mg
      1. region m:1-136 [120510]
    21. 2aw4
      complexed with mg
      1. region m:1-136 [127401]
    22. 2awb
      automatically matched to 2AW4 M:1-136
      complexed with mg
      1. region m:1-136 [127423]
    23. 2z4l
      automatically matched to d1vs6m1
      complexed with mg, par, zn
      1. region m:1-136 [154091]
    24. 2z4n
      automatically matched to d1vs6m1
      complexed with mg, par, zn
      1. region m:1-136 [154145]
    25. 2vhm
      automatically matched to d1vs6m1
      complexed with mg; mutant
      1. region m:1-136 [153076]
    26. 2vhn
      automatically matched to d1vs6m1
      complexed with mg
      1. region m:1-136 [153108]
    27. 2rdo
      automatically matched to d1vs6m1
      1. region m:1-136 [151953]
    28. 2j28
      automatically matched to 2AW4 M:1-136
      complexed with mg
      1. region m:1-136 [137965]
    29. 3bbx
      automatically matched to d1vs6m1
      complexed with mg
      1. region m:1-136 [155110]
  3. Deinococcus radiodurans [TaxId: 1299] [160196] (6)
    SQ Q9RXJ5 5-140
    1. 2zjr
      Representative structure
      complexed with mg
      1. region j:6-141 [154563]
    2. 1y69
      automatically matched to 2ZJR J:6-141
      mutant
      1. region k:6-141 [145906]
    3. 2zjq
      automatically matched to 2ZJR J:6-141
      1. region j:6-141 [154534]
    4. 3cf5
      automatically matched to 2ZJR J:6-141
      complexed with mg, txx
      1. region j:6-141 [156550]
    5. 2zjp
      automatically matched to 2ZJR J:6-141
      complexed with mg, nsh, zn
      1. region j:6-141 [154502]
    6. 3dll
      automatically matched to 2ZJR J:6-141
      complexed with mg, zld, zn
      1. region j:6-141 [157787]
  4. Thermus thermophilus [TaxId: 274] [160197] (5)
    1. 2j01
      automatically matched to d1wkia_
      1. region q:6-141 [145573]
    2. 2j03
      automatically matched to d1wkia_
      complexed with lys
      1. region q:6-141 [145600]
    3. 2hgq
      automatically matched to d1wkia_
      1. region p:6-141 [145351]
    4. 2hgj
      automatically matched to d1wkia_
      1. region p:6-141 [145319]
    5. 2hgu
      automatically matched to d1wkia_
      1. region p:6-141 [145383]