Structural Classification of Proteins
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Family: PaaI/YdiI-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Thioesterase/thiol ester dehydrase-isomerase [54636]
    core: beta-alpha-beta(4); 2 layers: alpha/beta
  4. Superfamily: Thioesterase/thiol ester dehydrase-isomerase [54637]
    link to SUPERFAMILY database - Superfamily
  5. Family: PaaI/YdiI-like [89902]

Protein Domains:

  1. Phenylacetic acid degradation protein PaaI [89903]
    1. Escherichia coli [TaxId: 562] [89904] (3) picpic
    2. Thermus thermophilus [TaxId: 274] [102909] (26) picpic
  2. Hypothetical protein HI1161 [89905]
    1. Haemophilus influenzae [TaxId: 727] [89906] (10) picpic
  3. Hypothetical protein YdiI [102910]
    1. Escherichia coli [TaxId: 562] [102911] (3) picpic
  4. Hypothetical protein YbdB [102912]
    1. Escherichia coli [TaxId: 562] [102913] (1) picpic
  5. 4-hydroxybenzoyl CoA thioesterase [102914]
    1. Arthrobacter sp., strain su [TaxId: 1667] [102915] (3) picpic
  6. Hypothetical protein PH1136 [102916]
    1. Archaeon Pyrococcus horikoshii [TaxId: 53953] [102917] (1) picpic
  7. Putative thioesterase SO4397 [110898]
    1. Shewanella oneidensis [TaxId: 70863] [110899] (1) picpic
      SQ Q8E989
  8. Hypothetical protein PA5026 [110900]
    1. Pseudomonas aeruginosa [TaxId: 287] [110901] (1) picpic
      SQ Q9HUE3
  9. Hypothetical protein PA5202 [143175]
    1. Pseudomonas aeruginosa [TaxId: 287] [143176] (2) picpic
      SQ Q9HTY7 4-129
  10. Hypothetical protein CC3309 [143177]
    1. Caulobacter crescentus [TaxId: 155892] [143178] (1) picpic
      SQ Q9A395 12-153
  11. Hypothetical protein Them2 [143179]
    1. Mouse (Mus musculus) [TaxId: 10090] [143180] (2) picpic
      SQ Q9CQR4 13-139
    2. Human (Homo sapiens) [TaxId: 9606] [143181] (12) picpic
      SQ Q9NPJ3 19-139! SQ Q9NPJ3 3-138
  12. Hypothetical protein PA1835 [143182]
    1. Pseudomonas aeruginosa [TaxId: 287] [143183] (2) picpic
      SQ Q9I2R0 1-145
  13. Transcription factor FapR, C-terminal domain [143184]
    1. Bacillus subtilis [TaxId: 1423] [143185] (6) picpic
      SQ O34835 66-186! SQ O34835 73-183
  14. Hypothetical protein RHA1_ro05818 [160184]
    includes two extra N-terminal helices forming an interlocking four-helical bundle in the dimer
    1. Rhodococcus sp. RHA1 [TaxId: 101510] [160185] (3) picpic
      SQ Q0S4E1 7-209
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk