Structural Classification of Proteins
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Superfamily: Cdc48 domain 2-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Cdc48 domain 2-like [54584]
    beta-alpha-beta(3); 2 layers: alpha/beta
  4. Superfamily: Cdc48 domain 2-like [54585]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Cdc48 domain 2-like [54586] (5)
    1. C-terminal domain of NSF-N, NSF-Nc [54587]
      NSF-N, the N-terminal 'functional' domain of the N-ethylmaleimide sensitive fusion protein, consists of two structural domains
      1. Hamster (Cricetulus griseus) [TaxId: 10029] [54588] (2) picpic
      2. Baker's yeast (Saccharomyces cerevisiae), sec18p [TaxId: 4932] [54589] (1) picpic
    2. C-terminal domain of VAT-N, VAT-Nc [54590]
      VAT-N is the N-terminal 'functional' domain of the VCP-like ATPase
      1. Archaeon Thermoplasma acidophilum [TaxId: 2303] [54591] (2) picpic
    3. Membrane fusion atpase p97 domain 2, P97-Nc [64254]
      1. Mouse (Mus musculus) [TaxId: 10090] [64255] (5) picpic
    4. Peroxisome biogenesis factor 1 (PEX-1), domain 2 [110874]
      1. Mouse (Mus musculus) [TaxId: 10090] [110875] (1) picpic
        SQ Q5BL07 13-179
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk