Structural Classification of Proteins
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Protein: Green fluorescent protein, GFP from Jellyfish (Aequorea victoria) [TaxId: 6100]

SQ P42212

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: GFP-like [54510]
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. Superfamily: GFP-like [54511]
    link to SUPERFAMILY database - Superfamily
  5. Family: Fluorescent proteins [54512]
  6. Protein: Green fluorescent protein, GFP [54513]
  7. Species: Jellyfish (Aequorea victoria) [TaxId: 6100] [54514]
    SQ P42212

PDB Entry Domains:

  1. 1oxd picpic
    "gold" class of GFP; cyan fluorescent protein
    complexed with nyc; mutant
    1. chain a [93687] picpiclink
  2. 1oxe picpic
    "gold" class of GFP; cyan fluorescent protein
    complexed with nyc; mutant
    1. chain a [93688] picpiclink
  3. 1kyp picpic
    Zn biosensor, apo form
    complexed with crg, mo6; mutant
    1. chain a [73280] picpiclink
  4. 1q4e picpic
    complexed with cro; mutant
    1. chain a [95788] picpiclink
  5. 1kys picpic
    Zn biosensor, Zn-bound form
    complexed with crg, zn, zn3; mutant
    1. chain a [73288] picpiclink
  6. 1q4a picpic
    complexed with cro; mutant
    1. chain a [95784] picpiclink
  7. 1qyf picpic
    complexed with cro, egl, mo5; mutant
    1. chain a [96588] picpiclink
  8. 1kyr picpic
    Zn biosensor, Cu-bound form
    complexed with crg, cu, mg; mutant
    1. chain a [73287] picpiclink
  9. 1h6r picpic
    a redox sensitive variant
    complexed with cl, pia; mutant
    1. chain a [65683] picpiclink
    2. chain b [65684] picpiclink
    3. chain c [65685] picpiclink
  10. 1s6z picpic
    complexed with cl, cr0; mutant
    1. chain a [98613] picpiclink
  11. 1q4c picpic
    complexed with cro; mutant
    1. chain a [95786] picpiclink
  12. 1q4b picpic
    complexed with cro; mutant
    1. chain a [95785] picpiclink
  13. 1jbz picpic
    a dual-wavelength emission variant
    complexed with cro, edo, mg; mutant
    1. chain a [77103] picpiclink
  14. 1q73 picpic
    complexed with cro; mutant
    1. chain a [96018] picpiclink
  15. 1q4d picpic
    complexed with cro; mutant
    1. chain a [95787] picpiclink
  16. 1oxf picpic
    "gold" class of GFP; cyan fluorescent protein
    complexed with 4in, 5za
    1. chain a [93689] picpiclink
  17. 1qyo picpic
    mutant
    1. chain a [96601] picpiclink
  18. 1rmo picpic
    complexed with 32t, cro
    1. chain a [105016] picpiclink
  19. 1qyq picpic
    complexed with cr5; mutant
    1. chain a [96602] picpiclink
  20. 1qy3 picpic
    mutant
    1. chain a [96570] picpiclink
  21. 1hcj picpic
    Photoproduct of the wild-type GFP
    complexed with csy; mutant
    1. chain a [65792] picpiclink
    2. chain b [65793] picpiclink
    3. chain c [65794] picpiclink
    4. chain d [65795] picpiclink
  22. 1huy picpic
    citrine, an improved yellow-emission variant
    complexed with cro; mutant
    1. chain a [61280] picpiclink
  23. 1rmm picpic
    complexed with 32s, cro
    1. chain a [105015] picpiclink
  24. 1ema picpic
    complexed with cro; mutant
    1. chain a [38339] picpiclink
  25. 1qxt picpic
    mutant
    1. chain a [96562] picpiclink
  26. 2emd picpic
    complexed with csh; mutant
    1. chain a [38340] picpiclink
  27. 1emg picpic
    complexed with cro; mutant
    1. chain a [38346] picpiclink
  28. 1gfl picpic
    mutant
    1. chain a [38341] picpiclink
    2. chain b [38342] picpiclink
  29. 1jby picpic
    a dual-wavelength emission variant
    complexed with cro; mutant
    1. chain a [77102] picpiclink
  30. 1myw picpic
    yellow-emission variant
    complexed with cr2; mutant
    1. chain a [79678] picpiclink
  31. 1rrx picpic
    complexed with mfc, yof
    1. chain a [105085] picpiclink
  32. 1emb picpic
    complexed with cro; mutant
    1. chain a [38344] picpiclink
  33. 1emk picpic
    complexed with ccy; mutant
    1. chain a [38343] picpiclink
  34. 1bfp picpic
    blue-emission variant
    complexed with iic; mutant
    1. chain a [38345] picpiclink
  35. 1emc picpic
    complexed with csy; mutant
    1. chain a [38352] picpiclink
    2. chain b [38353] picpiclink
    3. chain c [38354] picpiclink
    4. chain d [38355] picpiclink
  36. 1emf picpic
    complexed with csh; mutant
    1. chain a [38349] picpiclink
  37. 1emm picpic
    complexed with csy; mutant
    1. chain a [38348] picpiclink
  38. 2emn picpic
    complexed with csh; mutant
    1. chain a [38351] picpiclink
  39. 1kp5 picpic
    cyclic variant with linked natural termini
    complexed with csy, so4; mutant
    1. chain a [72842] picpiclink
    2. chain b [72843] picpiclink
  40. 1eml picpic
    complexed with csy; mutant
    1. chain a [38350] picpiclink
  41. 1jc1 picpic
    complexed with cro; mutant
    1. chain a [90888] picpiclink
    2. chain b [90889] picpiclink
    3. chain c [90890] picpiclink
  42. 1eme picpic
    complexed with csy; mutant
    1. chain a [38357] picpiclink
  43. 1b9c picpic
    complexed with cro; mutant
    1. chain a [38358] picpiclink
    2. chain b [38359] picpiclink
    3. chain c [38360] picpiclink
    4. chain d [38361] picpiclink
  44. 1yfp picpic
    yellow-emission variant
    complexed with cro; mutant
    1. chain a [38362] picpiclink
    2. chain b [38363] picpiclink
  45. 1f0b picpic
    complexed with cro; mutant
    1. chain a [38347] picpiclink
  46. 1c4f picpic
    complexed with cro; mutant
    1. chain a [38365] picpiclink
  47. 1f09 picpic
    complexed with cro, iod; mutant
    1. chain a [38356] picpiclink
  48. 2yfp picpic
    yellow-emission variant
    complexed with cro; mutant
    1. chain a [38364] picpiclink
  49. 1jc0 picpic
    complexed with cro; mutant
    1. chain a [90885] picpiclink
    2. chain b [90886] picpiclink
    3. chain c [90887] picpiclink
  50. 1rm9 picpic
    complexed with 4f3, 4fw
    1. chain a [105012] picpiclink
  51. 1cv7 picpic
    complexed with crf; mutant
    1. chain a [90428] picpiclink
  52. 2emo picpic
    complexed with csh; mutant
    1. chain a [38366] picpiclink
  53. 1rmp picpic
    complexed with 23s, cro
    1. chain a [105017] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk