Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: ssDNA-binding transcriptional regulator domain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: ssDNA-binding transcriptional regulator domain [54446]
    helix-swapped dimer of beta(4)-alpha motifs
  4. Superfamily: ssDNA-binding transcriptional regulator domain [54447]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Transcriptional coactivator PC4 C-terminal domain [54448] (1) picpic
    dimer of two separate motifs
  2. Plant transcriptional regulator PBF-2 [75375] (1) picpic
    single-chain domain formed by a tandem repeat of two motifs
  3. PMN2A0962/syc2379c-like [143038] (2) picpic
    Pfam 08848; DUF1818; specific to cyanobacteria; single-chain domain made of two repeats of this structural motif
  4. Guide RNA binding protein gBP [143043] (2) picpic
    includes PfamB 080318 and PB073991; forms heterooligomers; similar subunit and oligomeric structures to the Plant transcriptional regulator family
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk