Structural Classification of Proteins
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Superfamily: Peptide deformylase

nickel-dependent enzyme
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Peptide deformylase [56419]
    alpha-beta(5)-alpha; 3 layers: a/b/a; meander beta-sheet wraps around the C-terminal alpha-helix
  4. Superfamily: Peptide deformylase [56420]
    nickel-dependent enzyme
    link to SUPERFAMILY database - Superfamily

Families:

  1. Peptide deformylase [56421] (9)
    1. Peptide deformylase [56422]
      1. Escherichia coli [TaxId: 562] [56423] (21) picpic
      2. Pseudomonas aeruginosa [TaxId: 287] [75578] (4) picpic
      3. Leptospira interrogans [TaxId: 173] [103340] (1) picpic
        SQ Q72S74
      4. Staphylococcus aureus [TaxId: 1280] [75579] (6) picpic
        SQ Q9F4L4
      5. Streptococcus pneumoniae [TaxId: 1313] [90057] (1) picpic
      6. Thermotoga maritima [TaxId: 2336] [90058] (1) picpic
      7. Bacillus stearothermophilus [TaxId: 1422] [75580] (1) picpic
      8. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [75581] (3) picpic
      9. Thermus thermophilus [TaxId: 274] [118165] (1) picpic
        SQ P43522
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk