Structural Classification of Proteins
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Family: 2Fe-2S ferredoxin domains from multidomain proteins

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: beta-Grasp (ubiquitin-like) [54235]
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. Superfamily: 2Fe-2S ferredoxin-like [54292]
    link to SUPERFAMILY database - Superfamily
  5. Family: 2Fe-2S ferredoxin domains from multidomain proteins [54312]

Protein Domains:

  1. Fe-only hydrogenase, N-terminal domain [54313]
    1. Clostridium pasteurianum [TaxId: 1501] [54314] (4)
      1. 3c8y picpicxrefxref
        automatically matched to d1c4aa2
        complexed with fes, gol, hcn, sf4
        1. region a:1-126 [156058] picpiclink
      2. 1feh picpicxrefxref
        complexed with fs2, fsa, fsb, fsh, hc1, hc2
        1. region a:1-126 [37690] picpiclink
      3. 1c4c picpicxrefxref
        1. region a:1-126 [37691] picpiclink
      4. 1c4a picpicxrefxref
        1. region a:1-126 [37692] picpiclink
  2. Aldehyde oxidoreductase, N-terminal domain [54315]
    1. Desulfovibrio gigas [TaxId: 879] [54316] (3)
      SQ Q46509
      1. 1vlb picpicxrefxrefxref
        complexed with cl, fes, ipa, mg, pcd
        1. region a:1-80 [108740] picpiclink
      2. 1zcs picpicxrefxrefxref
        automatically matched to d1sija2
        complexed with ast, cl, fes, ipa, mg, pcd
        1. region a:1-80 [124913] picpiclink
      3. 1sij picpicxrefxrefxref
        complexed with ast, cl, fes, mg, pcd
        1. region a:1-80 [105582] picpiclink
    2. Desulfovibrio desulfuricans [TaxId: 876] [54317] (1)
      1. 1dgj picpicxrefxrefxref
        complexed with 2mo, fes, mcn
        1. region a:1-80 [37694] picpiclink
  3. Xanthine oxidase, N-terminal domain [54318]
    1. Cow (Bos taurus) [TaxId: 9913] [54319] (7)
      SQ P80457
      1. 1v97 picpicxrefxrefxrefxrefxref
        complexed with acy, ca, fad, fes, fyx, gol, mos, mte
        1. region a:3-92 [108437] picpiclink
        2. region b:3-92 [108443] picpiclink
      2. 1vdv picpicxrefxrefxrefxrefxref
        complexed with acy, ca, fad, fes, gol, mos, mte, ysh
        1. region a:3-92 [113615] picpiclink
        2. region b:3-92 [113621] picpiclink
      3. 1fo4 picpicxrefxrefxrefxrefxref
        complexed with ca, fad, fes, gol, mos, mte, sal
        1. region a:3-92 [37695] picpiclink
        2. region b:3-92 [37696] picpiclink
      4. 3b9j picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1fiqa2
        complexed with 290, ca, fad, fes, mos, mte
        1. region a:3-92 [155001] picpiclink
      5. 3b9j picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1fiqa2
        complexed with 290, ca, fad, fes, mos, mte
        1. region i:3-92 [155007] picpiclink
      6. 1fiq picpicxrefxrefxrefxrefxref
        complexed with fad, fes, gol, mos, mte, sal
        1. region a:2-92 [37697] picpiclink
      7. 1n5x picpicxrefxrefxrefxrefxref
        complexed with fad, fes, mos, mte, tei
        1. region a:3-92 [85343] picpiclink
        2. region b:3-92 [85349] picpiclink
  4. Xanthine dehydrogenase chain A, N-terminal domain [69666]
    1. Rhodobacter capsulatus [TaxId: 1061] [69667] (2)
      1. 1jro picpicxrefxrefxrefxrefxref
        complexed with ca, fad, fes, mos, mpn
        1. region a:1-84 [67138] picpiclink
        2. region c:1-84 [67144] picpiclink
        3. region e:1-84 [67150] picpiclink
        4. region g:1-84 [67156] picpiclink
      2. 1jrp picpicxrefxrefxrefxrefxref
        complexed with 141, ca, fad, fes, mos, mpn
        1. region a:1-84 [67162] picpiclink
        2. region c:1-84 [67168] picpiclink
        3. region e:1-84 [67174] picpiclink
        4. region g:1-84 [67180] picpiclink
  5. Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain [54320]
    1. Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137] [54321] (5)
      1. 1n62 picpicxrefxrefxrefxrefxref
        complexed with cub, fad, fes, mcn, po4
        1. region a:3-81 [80091] picpiclink
        2. region d:2-81 [80097] picpiclink
      2. 1n60 picpicxrefxrefxrefxrefxref
        complexed with fad, fes, mcn, omo, po4
        1. region a:3-81 [80067] picpiclink
        2. region d:3-81 [80073] picpiclink
      3. 1n63 picpicxrefxrefxrefxrefxref
        complexed with cun, fad, fes, mcn, po4
        1. region a:3-81 [80103] picpiclink
        2. region d:3-81 [80109] picpiclink
      4. 1n61 picpicxrefxrefxrefxrefxref
        complexed with cun, fad, fes, mcn, po4
        1. region a:3-81 [80079] picpiclink
        2. region d:3-81 [80085] picpiclink
      5. 1n5w picpicxrefxrefxrefxrefxref
        complexed with cum, fad, fes, mcn, po4
        1. region a:3-81 [80046] picpiclink
        2. region d:3-81 [80052] picpiclink
    2. Hydrogenophaga pseudoflava [TaxId: 47421] [54322] (4)
      1. 1zxi picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ffud2
        complexed with cu, cum, fad, fes, mcn, po4
        1. region a:3-81 [125773] picpiclink
      2. 1zxi picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ffud2
        complexed with cu, cum, fad, fes, mcn, po4
        1. region d:3-81 [125779] picpiclink
      3. 1ffv picpicxrefxrefxrefxrefxref
        complexed with aro, csz, fad, fes, pcd
        1. region a:3-81 [37700] picpiclink
        2. region d:2-81 [37701] picpiclink
      4. 1ffu picpicxrefxrefxrefxrefxref
        complexed with aro, cdp, csz, fad, fes
        1. region a:3-81 [37702] picpiclink
        2. region d:2-81 [37703] picpiclink
  6. Phthalate dioxygenase reductase, C-terminal domain [54323]
    two other domains are common to ferredoxin reductase
    1. Pseudomonas cepacia, db01 [TaxId: 292] [54324] (1)
      1. 2pia picpicxrefxref
        complexed with fes, fmn
        1. region a:224-321 [37704] picpiclink
  7. Benzoate dioxygenase reductase, N-terminal domain [75368]
    1. Acinetobacter sp. [TaxId: 472] [75369] (1)
      1. 1krh picpicxrefxref
        CASP4
        complexed with fad, fes, so4
        1. region a:2-105 [72893] picpiclink
        2. region b:2-105 [72896] picpiclink
  8. Succinate dehydogenase iron-sulfur protein, N-terminal domain [82586]
    1. Escherichia coli [TaxId: 562] [82587] (3)
      1. 1nek picpicxrefxrefxrefxrefxrefxref
        complexed with ca, cdn, eph, f3s, fad, fes, fs4, hem, oaa, uq2
        1. region b:1-106 [80430] picpiclink
      2. 1nen picpicxrefxrefxrefxrefxrefxref
        complexed with ca, cdn, dnt, eph, f3s, fad, fes, fs4, hem, oaa
        1. region b:1-106 [80437] picpiclink
      3. 2acz picpicxrefxrefxref
        automatically matched to d1nekb2
        complexed with at5, cdn, f3s, fad, fes, heb, oaa, sf4
        1. region b:1-106 [126565] picpiclink
  9. Fumarate reductase iron-sulfur protein, N-terminal domain [54325]
    1. Escherichia coli [TaxId: 562] [54326] (7)
      1. 1kf6 picpicxrefxrefxrefxrefxrefxref
        complexed with 1pe, act, ce1, f3s, fad, fes, fs4, hqo, k, oaa
        1. region b:1-105 [72398] picpiclink
        2. region n:1-105 [72405] picpiclink
      2. 1l0v picpicxrefxrefxrefxrefxrefxref
        complexed with ce1, f3s, fad, fes, fs4, mq7, oaa
        1. region b:1-105 [73416] picpiclink
        2. region n:1-105 [73423] picpiclink
      3. 1kfy picpicxrefxrefxrefxrefxrefxref
        complexed with brs, ce1, f3s, fad, fes, fs4, oaa
        1. region b:1-105 [72431] picpiclink
        2. region n:1-105 [72438] picpiclink
      4. 3cir picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kf6b2
        complexed with f3s, fad, fes, sf4; mutant
        1. region b:1-105 [156683] picpiclink
      5. 3cir picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kf6b2
        complexed with f3s, fad, fes, sf4; mutant
        1. region n:1-105 [156690] picpiclink
      6. 2b76 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kf6b2
        complexed with f3s, fad, fes, flc, mq7, sf4; mutant
        1. region b:1-105 [128013] picpiclink
      7. 2b76 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kf6b2
        complexed with f3s, fad, fes, flc, mq7, sf4; mutant
        1. region n:1-105 [128020] picpiclink
    2. Wolinella succinogenes [TaxId: 844] [54327] (8)
      1. 2bs2 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1e7pb2
        complexed with f3s, fad, fes, fmr, hem, lmt, na, sf4
        1. region b:1-106 [129034] picpiclink
      2. 2bs2 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1e7pb2
        complexed with f3s, fad, fes, fmr, hem, lmt, na, sf4
        1. region e:1-106 [129040] picpiclink
      3. 2bs3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1e7pb2
        complexed with cit, f3s, fad, fes, hem, lmt, na, sf4
        1. region b:1-106 [129046] picpiclink
      4. 2bs3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1e7pb2
        complexed with cit, f3s, fad, fes, hem, lmt, na, sf4
        1. region e:1-106 [129051] picpiclink
      5. 1qlb picpicxrefxrefxrefxrefxref
        1. region b:1-106 [37709] picpiclink
        2. region e:1-106 [37710] picpiclink
      6. 2bs4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1e7pb2
        complexed with cit, dmw, f3s, fad, fes, hem, lmt, na, sf4
        1. region b:1-106 [129056] picpiclink
      7. 2bs4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1e7pb2
        complexed with cit, dmw, f3s, fad, fes, hem, lmt, na, sf4
        1. region e:1-106 [129061] picpiclink
      8. 1e7p picpicxrefxrefxrefxrefxref
        complexed with f3s, fad, fes, fs4, hem, lmt, mla, na; mutant
        1. region b:1-106 [59351] picpiclink
        2. region e:1-106 [59357] picpiclink
        3. region h:1-106 [59363] picpiclink
        4. region k:1-106 [59369] picpiclink
  10. Methane monooxygenase reductase N-terminal domain [69668]
    1. Methylococcus capsulatus [TaxId: 414] [69669] (1)
      1. 1jq4 picpic
        complexed with fes
        1. chain a [67083] picpiclink
  11. Quinoline 2-oxidoreductase small subunit QorS, N-domain [110808]
    1. Pseudomonas putida [TaxId: 303] [110809] (1)
      SQ P72223
      1. 1t3q picpicxrefxrefxrefxrefxref
        complexed with fad, fes, gol, mcn, smo, so4
        1. region a:7-87 [106368] picpiclink
        2. region d:7-87 [106374] picpiclink
  12. 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain [117836]
    1. Thauera aromatica [TaxId: 59405] [117837] (2)
      SQ O33818
      1. 1rm6 picpicxrefxrefxrefxrefxref
        complexed with cl, epe, fad, fes, fs4, k, na, pcd, so4
        1. region c:1-81 [111877] picpiclink
        2. region f:1-81 [111883] picpiclink
      2. 1sb3 picpicxrefxrefxrefxrefxref
        complexed with epe, fad, fes, fs4, pcd, so4
        1. region c:1-81 [112057] picpiclink
        2. region f:1-81 [112063] picpiclink
  13. Nadh-quinone oxidoreductase chain 3, Nqo3, N-terminal domain [142982]
    1. Thermus thermophilus [TaxId: 274] [142983] (4)
      SQ Q56223 1-95
      1. 2fug picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, fmn, sf4
        1. region 3:1-95 [134127] picpiclink
      2. 2fug picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2FUG 3:1-95
        complexed with fes, fmn, sf4
        1. region c:1-95 [134140] picpiclink
      3. 2fug picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2FUG 3:1-95
        complexed with fes, fmn, sf4
        1. region l:1-95 [134153] picpiclink
      4. 2fug picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2FUG 3:1-95
        complexed with fes, fmn, sf4
        1. region u:1-95 [134166] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk