Structural Classification of Proteins
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Superfamily: 2Fe-2S ferredoxin-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: beta-Grasp (ubiquitin-like) [54235]
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. Superfamily: 2Fe-2S ferredoxin-like [54292]
    link to SUPERFAMILY database - Superfamily

Families:

  1. 2Fe-2S ferredoxin-related [54293] (19)
    1. 2Fe-2S ferredoxin [54294]
      1. Cyanobacterium (Anabaena sp.), pcc 7119 and 7120 [TaxId: 1167] [54295] (12) picpic
      2. Spirulina platensis [TaxId: 118562] [54296] (1) picpic
      3. Cyanobacterium (Aphanothece sacrum) [TaxId: 1122] [54297] (1) picpic
      4. Synechocystis sp., pcc 6803 [TaxId: 1143] [54298] (3) picpic
      5. Synechococcus elongatus [TaxId: 32046] [54299] (3) picpic
      6. Chlorella fusca [TaxId: 3073] [54300] (1) picpic
      7. Equisetum arvense [TaxId: 3258] [54301] (2) picpic
        SQ P00237 # isoform II
      8. Archaeon Haloarcula marismortui [TaxId: 2238] [54302] (1) picpic
      9. Archaeon Halobacterium halobium [TaxId: 2242] [64228] (2) picpic
      10. Parsley (Petroselinum crispum) [TaxId: 4043] [54303] (1) picpic
      11. Spinach (Spinacia oleracea) [TaxId: 3562] [54304] (1) picpic
      12. Maize (Zea mays) [TaxId: 4577] [54305] (1) picpic
      13. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [102799] (1) picpic
      14. Trichomonas vaginalis [TaxId: 5722] [75365] (1) picpic
      15. Rhodobacter capsulatus, ferredoxin VI [TaxId: 1061] [64230] (2) picpic
      16. Pseudomonas putida, putidaredoxin [TaxId: 303] [54307] (18) picpic
      17. Pseudomonas sp., terpredoxin [TaxId: 306] [54309] (1) picpic
    2. Adrenodoxin-like ferredoxin [75366]
      1. Escherichia coli [TaxId: 562] [75367] (1) picpic
    3. Adrenodoxin [54310]
      1. Cow (Bos taurus) [TaxId: 9913] [54311] (7) picpic
  2. 2Fe-2S ferredoxin domains from multidomain proteins [54312] (16)
    1. Fe-only hydrogenase, N-terminal domain [54313]
      1. Clostridium pasteurianum [TaxId: 1501] [54314] (4) picpic
    2. Aldehyde oxidoreductase, N-terminal domain [54315]
      1. Desulfovibrio gigas [TaxId: 879] [54316] (3) picpic
        SQ Q46509
      2. Desulfovibrio desulfuricans [TaxId: 876] [54317] (1) picpic
    3. Xanthine oxidase, N-terminal domain [54318]
      1. Cow (Bos taurus) [TaxId: 9913] [54319] (7) picpic
        SQ P80457
    4. Xanthine dehydrogenase chain A, N-terminal domain [69666]
      1. Rhodobacter capsulatus [TaxId: 1061] [69667] (2) picpic
    5. Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain [54320]
      1. Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137] [54321] (5) picpic
      2. Hydrogenophaga pseudoflava [TaxId: 47421] [54322] (4) picpic
    6. Phthalate dioxygenase reductase, C-terminal domain [54323]
      two other domains are common to ferredoxin reductase
      1. Pseudomonas cepacia, db01 [TaxId: 292] [54324] (1) picpic
    7. Benzoate dioxygenase reductase, N-terminal domain [75368]
      1. Acinetobacter sp. [TaxId: 472] [75369] (1) picpic
    8. Succinate dehydogenase iron-sulfur protein, N-terminal domain [82586]
      1. Escherichia coli [TaxId: 562] [82587] (3) picpic
    9. Fumarate reductase iron-sulfur protein, N-terminal domain [54325]
      1. Escherichia coli [TaxId: 562] [54326] (7) picpic
      2. Wolinella succinogenes [TaxId: 844] [54327] (8) picpic
    10. Methane monooxygenase reductase N-terminal domain [69668]
      1. Methylococcus capsulatus [TaxId: 414] [69669] (1) picpic
    11. Quinoline 2-oxidoreductase small subunit QorS, N-domain [110808]
      1. Pseudomonas putida [TaxId: 303] [110809] (1) picpic
        SQ P72223
    12. 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain [117836]
      1. Thauera aromatica [TaxId: 59405] [117837] (2) picpic
        SQ O33818
    13. Nadh-quinone oxidoreductase chain 3, Nqo3, N-terminal domain [142982]
      1. Thermus thermophilus [TaxId: 274] [142983] (4) picpic
        SQ Q56223 1-95

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk