Structural Classification of Proteins
Superfamily: 2Fe-2S ferredoxin-like
uperfamily
Lineage:
Root:
scop
Class:
Alpha and beta proteins (a+b)
[53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold:
beta-Grasp (ubiquitin-like)
[54235]
core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
Superfamily:
2Fe-2S ferredoxin-like
[54292]
uperfamily
Families:
2Fe-2S ferredoxin-related
[54293] (19)
2Fe-2S ferredoxin [54294]
Cyanobacterium (Anabaena sp.), pcc 7119 and 7120
[TaxId: 1167]
[54295] (12)
1czp
chain a
[37645]
chain b
[37646]
1qt9
chain a
[37647]
1frd
complexed with fes
chain a
[37648]
1qoa
complexed with fes; mutant
chain a
[37649]
chain b
[37650]
1j7c
complexed with fes; mutant
chain a
[62679]
1j7a
complexed with fes; mutant
chain a
[62677]
1j7b
complexed with fes; mutant
chain a
[62678]
1qob
complexed with fes, so4; mutant
chain a
[37655]
chain b
[37656]
1qof
complexed with fes, so4; mutant
chain a
[37653]
chain b
[37654]
1qog
complexed with fes, so4; mutant
chain a
[37657]
chain b
[37658]
1fxa
complexed with fes
chain a
[37660]
chain b
[37661]
1ewy
complexed with fad, fes
chain c
[37662]
Spirulina platensis
[TaxId: 118562]
[54296] (1)
4fxc
complexed with fes
chain a
[37663]
Cyanobacterium (Aphanothece sacrum)
[TaxId: 1122]
[54297] (1)
1fxi
complexed with fes
chain a
[37664]
chain b
[37665]
chain c
[37666]
chain d
[37667]
Synechocystis sp., pcc 6803
[TaxId: 1143]
[54298] (3)
1off
complexed with fes
chain a
[86947]
1doy
complexed with fes
chain a
[37669]
1dox
complexed with fes
chain a
[37668]
Synechococcus elongatus
[TaxId: 32046]
[54299] (3)
2cjo
chain a
[37671]
2cjn
chain a
[37670]
1roe
complexed with fes
chain a
[37672]
Chlorella fusca
[TaxId: 3073]
[54300] (1)
1awd
complexed with fes
chain a
[37673]
Equisetum arvense
[TaxId: 3258]
[54301] (2)
SQ
P00237
# isoform II
1wri
complexed with bdn, fes
chain a
[114838]
1frr
complexed with fes
chain a
[37674]
chain b
[37675]
Archaeon Haloarcula marismortui
[TaxId: 2238]
[54302] (1)
1doi
CASP1
complexed with fes, k
chain a
[37676]
Archaeon Halobacterium halobium
[TaxId: 2242]
[64228] (2)
1e10
complexed with ace, fes
chain a
[59154]
1e0z
complexed with ace, fes
chain a
[59153]
Parsley (Petroselinum crispum)
[TaxId: 4043]
[54303] (1)
1pfd
complexed with fes
chain a
[37677]
Spinach (Spinacia oleracea)
[TaxId: 3562]
[54304] (1)
1a70
complexed with fes; mutant
chain a
[37678]
Maize (Zea mays)
[TaxId: 4577]
[54305] (1)
1gaq
complexed with fad, fes
chain b
[37679]
Malaria parasite (Plasmodium falciparum)
[TaxId: 5833]
[102799] (1)
1iue
complexed with fes, na
chain a
[90697]
chain b
[90698]
Trichomonas vaginalis
[TaxId: 5722]
[75365] (1)
1l5p
complexed with fes
chain a
[73598]
chain b
[73599]
chain c
[73600]
Rhodobacter capsulatus, ferredoxin VI
[TaxId: 1061]
[64230] (2)
1e9m
complexed with fes
chain a
[59397]
1uwm
automatically matched to d1e9ma_
complexed with fes
region a:1-106
[119763]
Pseudomonas putida, putidaredoxin
[TaxId: 303]
[54307] (18)
1xlq
automatically matched to d1oqra_
complexed with fes; mutant
region a:1-106
[122119]
1xlq
automatically matched to d1oqra_
complexed with fes; mutant
region b:1-106
[122120]
1xlq
automatically matched to d1oqra_
complexed with fes; mutant
region c:1-106
[122121]
1oqq
complexed with fes; mutant
chain a
[93422]
chain b
[93423]
1oqr
complexed with fes; mutant
chain a
[93424]
chain b
[93425]
chain c
[93426]
1r7s
complexed with fes; mutant
chain a
[97207]
chain b
[97208]
chain c
[97209]
1xlo
automatically matched to d1oqqa_
complexed with fes; mutant
region a:1-106
[122114]
1xlo
automatically matched to d1oqqa_
complexed with fes; mutant
region b:1-106
[122115]
1xln
automatically matched to d1oqqa_
complexed with fes; mutant
region a:1-106
[122112]
1xln
automatically matched to d1oqqa_
complexed with fes; mutant
region b:1-106
[122113]
1xlp
automatically matched to d1oqra_
complexed with fes; mutant
region a:1-106
[122116]
1xlp
automatically matched to d1oqra_
complexed with fes; mutant
region b:1-106
[122117]
1xlp
automatically matched to d1oqra_
complexed with fes; mutant
region c:1-106
[122118]
1yjj
automatically matched to d1pdxa_
complexed with fes
region a:1-106
[123422]
1yji
automatically matched to d1pdxa_
complexed with fes
region a:1-106
[123421]
1put
complexed with fes
chain a
[37680]
1pdx
complexed with fes
chain a
[37682]
1gpx
complexed with ga; mutant
chain a
[37681]
Pseudomonas sp., terpredoxin
[TaxId: 306]
[54309] (1)
1b9r
complexed with fes
chain a
[37683]
Adrenodoxin-like ferredoxin [75366]
Escherichia coli
[TaxId: 562]
[75367] (1)
1i7h
complexed with fes
chain a
[71122]
chain b
[71123]
chain c
[71124]
Adrenodoxin [54310]
Cow (Bos taurus)
[TaxId: 9913]
[54311] (7)
2bt6
automatically matched to d1e6eb_
complexed with fes, mg, rua
region a:5-108
[129152]
2bt6
automatically matched to d1e6eb_
complexed with fes, mg, rua
region b:5-108
[129153]
1ayf
complexed with fes, gol
chain a
[37684]
chain b
[37685]
1e6e
complexed with fad, fes, so4; mutant
chain b
[59300]
chain d
[59303]
1cje
chain a
[37686]
chain b
[37687]
chain c
[37688]
chain d
[37689]
1l6u
complexed with fes
chain a
[73630]
1l6v
complexed with fes
chain a
[73631]
2Fe-2S ferredoxin domains from multidomain proteins
[54312] (16)
Fe-only hydrogenase, N-terminal domain [54313]
Clostridium pasteurianum
[TaxId: 1501]
[54314] (4)
3c8y
automatically matched to d1c4aa2
complexed with fes, gol, hcn, sf4
region a:1-126
[156058]
1feh
complexed with fs2, fsa, fsb, fsh, hc1, hc2
region a:1-126
[37690]
1c4c
region a:1-126
[37691]
1c4a
region a:1-126
[37692]
Aldehyde oxidoreductase, N-terminal domain [54315]
Desulfovibrio gigas
[TaxId: 879]
[54316] (3)
SQ
Q46509
1vlb
complexed with cl, fes, ipa, mg, pcd
region a:1-80
[108740]
1zcs
automatically matched to d1sija2
complexed with ast, cl, fes, ipa, mg, pcd
region a:1-80
[124913]
1sij
complexed with ast, cl, fes, mg, pcd
region a:1-80
[105582]
Desulfovibrio desulfuricans
[TaxId: 876]
[54317] (1)
1dgj
complexed with 2mo, fes, mcn
region a:1-80
[37694]
Xanthine oxidase, N-terminal domain [54318]
Cow (Bos taurus)
[TaxId: 9913]
[54319] (7)
SQ
P80457
1v97
complexed with acy, ca, fad, fes, fyx, gol, mos, mte
region a:3-92
[108437]
region b:3-92
[108443]
1vdv
complexed with acy, ca, fad, fes, gol, mos, mte, ysh
region a:3-92
[113615]
region b:3-92
[113621]
1fo4
complexed with ca, fad, fes, gol, mos, mte, sal
region a:3-92
[37695]
region b:3-92
[37696]
3b9j
automatically matched to d1fiqa2
complexed with 290, ca, fad, fes, mos, mte
region a:3-92
[155001]
3b9j
automatically matched to d1fiqa2
complexed with 290, ca, fad, fes, mos, mte
region i:3-92
[155007]
1fiq
complexed with fad, fes, gol, mos, mte, sal
region a:2-92
[37697]
1n5x
complexed with fad, fes, mos, mte, tei
region a:3-92
[85343]
region b:3-92
[85349]
Xanthine dehydrogenase chain A, N-terminal domain [69666]
Rhodobacter capsulatus
[TaxId: 1061]
[69667] (2)
1jro
complexed with ca, fad, fes, mos, mpn
region a:1-84
[67138]
region c:1-84
[67144]
region e:1-84
[67150]
region g:1-84
[67156]
1jrp
complexed with 141, ca, fad, fes, mos, mpn
region a:1-84
[67162]
region c:1-84
[67168]
region e:1-84
[67174]
region g:1-84
[67180]
Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain [54320]
Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans
[TaxId: 40137]
[54321] (5)
1n62
complexed with cub, fad, fes, mcn, po4
region a:3-81
[80091]
region d:2-81
[80097]
1n60
complexed with fad, fes, mcn, omo, po4
region a:3-81
[80067]
region d:3-81
[80073]
1n63
complexed with cun, fad, fes, mcn, po4
region a:3-81
[80103]
region d:3-81
[80109]
1n61
complexed with cun, fad, fes, mcn, po4
region a:3-81
[80079]
region d:3-81
[80085]
1n5w
complexed with cum, fad, fes, mcn, po4
region a:3-81
[80046]
region d:3-81
[80052]
Hydrogenophaga pseudoflava
[TaxId: 47421]
[54322] (4)
1zxi
automatically matched to d1ffud2
complexed with cu, cum, fad, fes, mcn, po4
region a:3-81
[125773]
1zxi
automatically matched to d1ffud2
complexed with cu, cum, fad, fes, mcn, po4
region d:3-81
[125779]
1ffv
complexed with aro, csz, fad, fes, pcd
region a:3-81
[37700]
region d:2-81
[37701]
1ffu
complexed with aro, cdp, csz, fad, fes
region a:3-81
[37702]
region d:2-81
[37703]
Phthalate dioxygenase reductase, C-terminal domain [54323]
two other domains are common to ferredoxin reductase
Pseudomonas cepacia, db01
[TaxId: 292]
[54324] (1)
2pia
complexed with fes, fmn
region a:224-321
[37704]
Benzoate dioxygenase reductase, N-terminal domain [75368]
Acinetobacter sp.
[TaxId: 472]
[75369] (1)
1krh
CASP4
complexed with fad, fes, so4
region a:2-105
[72893]
region b:2-105
[72896]
Succinate dehydogenase iron-sulfur protein, N-terminal domain [82586]
Escherichia coli
[TaxId: 562]
[82587] (3)
1nek
complexed with ca, cdn, eph, f3s, fad, fes, fs4, hem, oaa, uq2
region b:1-106
[80430]
1nen
complexed with ca, cdn, dnt, eph, f3s, fad, fes, fs4, hem, oaa
region b:1-106
[80437]
2acz
automatically matched to d1nekb2
complexed with at5, cdn, f3s, fad, fes, heb, oaa, sf4
region b:1-106
[126565]
Fumarate reductase iron-sulfur protein, N-terminal domain [54325]
Escherichia coli
[TaxId: 562]
[54326] (7)
1kf6
complexed with 1pe, act, ce1, f3s, fad, fes, fs4, hqo, k, oaa
region b:1-105
[72398]
region n:1-105
[72405]
1l0v
complexed with ce1, f3s, fad, fes, fs4, mq7, oaa
region b:1-105
[73416]
region n:1-105
[73423]
1kfy
complexed with brs, ce1, f3s, fad, fes, fs4, oaa
region b:1-105
[72431]
region n:1-105
[72438]
3cir
automatically matched to d1kf6b2
complexed with f3s, fad, fes, sf4; mutant
region b:1-105
[156683]
3cir
automatically matched to d1kf6b2
complexed with f3s, fad, fes, sf4; mutant
region n:1-105
[156690]
2b76
automatically matched to d1kf6b2
complexed with f3s, fad, fes, flc, mq7, sf4; mutant
region b:1-105
[128013]
2b76
automatically matched to d1kf6b2
complexed with f3s, fad, fes, flc, mq7, sf4; mutant
region n:1-105
[128020]
Wolinella succinogenes
[TaxId: 844]
[54327] (8)
2bs2
automatically matched to d1e7pb2
complexed with f3s, fad, fes, fmr, hem, lmt, na, sf4
region b:1-106
[129034]
2bs2
automatically matched to d1e7pb2
complexed with f3s, fad, fes, fmr, hem, lmt, na, sf4
region e:1-106
[129040]
2bs3
automatically matched to d1e7pb2
complexed with cit, f3s, fad, fes, hem, lmt, na, sf4
region b:1-106
[129046]
2bs3
automatically matched to d1e7pb2
complexed with cit, f3s, fad, fes, hem, lmt, na, sf4
region e:1-106
[129051]
1qlb
region b:1-106
[37709]
region e:1-106
[37710]
2bs4
automatically matched to d1e7pb2
complexed with cit, dmw, f3s, fad, fes, hem, lmt, na, sf4
region b:1-106
[129056]
2bs4
automatically matched to d1e7pb2
complexed with cit, dmw, f3s, fad, fes, hem, lmt, na, sf4
region e:1-106
[129061]
1e7p
complexed with f3s, fad, fes, fs4, hem, lmt, mla, na; mutant
region b:1-106
[59351]
region e:1-106
[59357]
region h:1-106
[59363]
region k:1-106
[59369]
Methane monooxygenase reductase N-terminal domain [69668]
Methylococcus capsulatus
[TaxId: 414]
[69669] (1)
1jq4
complexed with fes
chain a
[67083]
Quinoline 2-oxidoreductase small subunit QorS, N-domain [110808]
Pseudomonas putida
[TaxId: 303]
[110809] (1)
SQ
P72223
1t3q
complexed with fad, fes, gol, mcn, smo, so4
region a:7-87
[106368]
region d:7-87
[106374]
4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain [117836]
Thauera aromatica
[TaxId: 59405]
[117837] (2)
SQ
O33818
1rm6
complexed with cl, epe, fad, fes, fs4, k, na, pcd, so4
region c:1-81
[111877]
region f:1-81
[111883]
1sb3
complexed with epe, fad, fes, fs4, pcd, so4
region c:1-81
[112057]
region f:1-81
[112063]
Nadh-quinone oxidoreductase chain 3, Nqo3, N-terminal domain [142982]
Thermus thermophilus
[TaxId: 274]
[142983] (4)
SQ
Q56223
1-95
2fug
complexed with fes, fmn, sf4
region 3:1-95
[134127]
2fug
automatically matched to 2FUG 3:1-95
complexed with fes, fmn, sf4
region c:1-95
[134140]
2fug
automatically matched to 2FUG 3:1-95
complexed with fes, fmn, sf4
region l:1-95
[134153]
2fug
automatically matched to 2FUG 3:1-95
complexed with fes, fmn, sf4
region u:1-95
[134166]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
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© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk