Structural Classification of Proteins
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Family: GABARAP-like

intracellular membrane trafficking and fusion proteins

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: beta-Grasp (ubiquitin-like) [54235]
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. Superfamily: Ubiquitin-like [54236]
    link to SUPERFAMILY database - Superfamily
  5. Family: GABARAP-like [54253]
    intracellular membrane trafficking and fusion proteins

Protein Domains:

  1. Golgi-associated ATPase enhancer of 16 kD, Gate-16 [54254]
    1. Cow (Bos taurus) [TaxId: 9913] [54255] (1)
      1. 1eo6 picpic
        1. chain a [37609] picpiclink
        2. chain b [37610] picpiclink
  2. GABA(A) receptor associated protein GABARAP [69658]
    1. Human (Homo sapiens) [TaxId: 9606] [69659] (6)
      1. 3d32 picpic
        automatically matched to d1kota_
        complexed with cl, na, nh2
        1. region a:1-118 [157267] picpiclink
      2. 3d32 picpic
        automatically matched to d1kota_
        complexed with cl, na, nh2
        1. region b:3-118 [157268] picpiclink
      3. 1gnu picpic
        complexed with ni
        1. chain a [65403] picpiclink
      4. 1kot picpic
        1. chain a [68732] picpiclink
      5. 1klv picpic
        1. chain a [90965] picpiclink
      6. 1km7 picpic
        1. chain a [90966] picpiclink
    2. Rat (Rattus norvegicus) [TaxId: 10116] [75360] (1)
      1. 1kjt picpic
        complexed with na, ni
        1. chain a [72622] picpiclink
  3. Microtubule-associated proteins 1A/1B light chain 3B [110802]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [110803] (4)
      SQ Q62625 4-116
      1. 2z0d picpicxref
        automatically matched to d1ugma_
        mutant
        1. region b:5-117 [140096] picpiclink
      2. 2z0e picpicxref
        automatically matched to d1ugma_
        mutant
        1. region b:5-117 [140097] picpiclink
      3. 1ugm picpic
        1. chain a [107827] picpiclink
      4. 2k6q picpic
        automatically matched to d1ugma_
        1. region a:5-117 [148277] picpiclink
    2. Human (Homo sapiens) [TaxId: 9606] [117820] (3)
      SQ Q9GZQ8
      1. 2zjd picpic
        automatically matched to d1v49a_
        1. region a:2-120 [154484] picpiclink
      2. 2zjd picpic
        automatically matched to d1v49a_
        1. region c:2-120 [154485] picpiclink
      3. 1v49 picpic
        1. chain a [113525] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk