Structural Classification of Proteins
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Protein: Topoisomerase VI-B subunit from Archaeon Sulfolobus shibatae [TaxId: 2286]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ribosomal protein S5 domain 2-like [54210]
    core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover
  4. Superfamily: Ribosomal protein S5 domain 2-like [54211]
    link to SUPERFAMILY database - Superfamily
  5. Family: DNA gyrase/MutL, second domain [54224]
  6. Protein: Topoisomerase VI-B subunit [82577]
    contains an H2TH domain inserted in front of this domain and after the N-terminal ATPase domain
  7. Species: Archaeon Sulfolobus shibatae [TaxId: 2286] [82578]

PDB Entry Domains:

  1. 2hkj picpicxrefxref
    automatically matched to d1mu5a2
    complexed with dms, mg, rdc
    1. region a:307-470 [136554] picpiclink
  2. 1z5b picpicxrefxrefxrefxref
    automatically matched to d1mu5a2
    complexed with adp, alf, mg, so4
    1. region a:307-469 [124465] picpiclink
  3. 1z5b picpicxrefxrefxrefxref
    automatically matched to d1mu5a2
    complexed with adp, alf, mg, so4
    1. region b:307-463 [124468] picpiclink
  4. 1z59 picpicxrefxref
    automatically matched to d1mu5a2
    complexed with adp, mg
    1. region a:307-470 [124456] picpiclink
  5. 1mu5 picpicxrefxref
    complexed with ca
    1. region a:307-470 [79473] picpiclink
  6. 1z5c picpicxrefxrefxrefxref
    automatically matched to d1mu5a2
    complexed with adp, mg, po4
    1. region a:307-469 [124471] picpiclink
  7. 1z5c picpicxrefxrefxrefxref
    automatically matched to d1mu5a2
    complexed with adp, mg, po4
    1. region b:307-463 [124474] picpiclink
  8. 1z5a picpicxrefxrefxrefxref
    automatically matched to d1mu5a2
    complexed with adp, mg
    1. region a:307-469 [124459] picpiclink
  9. 1z5a picpicxrefxrefxrefxref
    automatically matched to d1mu5a2
    complexed with adp, mg
    1. region b:307-463 [124462] picpiclink
  10. 1mx0 picpicxrefxref
    complexed with anp, mg, mse, na
    1. region a:307-467 [79619] picpiclink
    2. region b:307-458 [79622] picpiclink
    3. region c:307-469 [79625] picpiclink
    4. region d:307-464 [79628] picpiclink
    5. region e:307-461 [79631] picpiclink
    6. region f:307-463 [79634] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk