Structural Classification of Proteins
home mail help root up expand collapse

Family: Ribosomal protein L31p

Pfam 01197

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: L28p-like [143799]
    unusual fold consisting of three beta-hairpins, that form a paper clip-like structure, and two helices; could have evolved from a glucocorticoid receptor-like zinc finger domain (scop_cf 57715)
  4. Superfamily: L28p-like [143800]
    In early ribosomal structures, L28p has been misinterpreted as L31p. in the Ribosomal protein L28p family, there are sequences containing two CxxC pairs. Threading these sequences into this fold brings the four cysteines in a similar site to the zinc-binding site of glucocorticoid receptor-like zinc fingers. In the Ribosomal protein L31p, there are also members with two CxxC pairs. However, these won't form a putative zinc-binding site in this fold. The L31p family are classified here temporarily, until its true fold is known
    link to SUPERFAMILY database - Superfamily
  5. Family: Ribosomal protein L31p [143804]
    Pfam 01197

Protein Domains:

  1. Ribosomal protein L31p [143805]
    1. Escherichia coli [TaxId: 562] [143806] (9)
      SQ P0A7M9 1-70
      1. 1vs6 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AW4 Z:1-70
        complexed with mg
        1. region z:1-70 [120502] picpiclink
      2. 1vs8 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AW4 Z:1-70
        complexed with mg
        1. region z:1-70 [120516] picpiclink
      3. 2aw4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg
        1. region z:1-70 [127407] picpiclink
      4. 2awb picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AW4 Z:1-70
        complexed with mg
        1. region z:1-70 [127429] picpiclink
      5. 2vhm picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1vs6z1
        complexed with mg; mutant
        1. region z:1-70 [153089] picpiclink
      6. 2vhn picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1vs6z1
        complexed with mg
        1. region z:1-70 [153121] picpiclink
      7. 2rdo picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1vs6z1
        1. region z:1-70 [151966] picpiclink
      8. 2j28 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AW4 Z:1-70
        complexed with mg
        1. region z:1-70 [137971] picpiclink
      9. 3bbx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1vs6z1
        complexed with mg
        1. region z:1-70 [155123] picpiclink
    2. Thermus thermophilus [TaxId: 274] [160711] (7)
      SQ Q5SJE1 1-50
      1. 2j01 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        putative assignment of L31 location in the ribosome structure; the protein shows no ordered structure
        1. region 4:1-50 [145559] picpiclink
      2. 2j03 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2J01 4:1-50
        complexed with lys
        1. region 4:1-50 [145586] picpiclink
      3. 2v47 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2J01 4:1-50
        1. region 4:1-50 [152505] picpiclink
      4. 2v49 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2J01 4:1-50
        1. region 4:1-50 [152541] picpiclink
      5. 2hgq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2J01 4:1-50
        1. region 3:1-50 [145331] picpiclink
      6. 2hgj picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2J01 4:1-50
        1. region 3:1-50 [145299] picpiclink
      7. 2hgu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2J01 4:1-50
        1. region 3:1-50 [145363] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk