Structural Classification of Proteins
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Protein: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF from Escherichia coli [TaxId: 562]

SQ P62617 ! SQ P36663

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Bacillus chorismate mutase-like [55297]
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
  4. Superfamily: IpsF-like [69765]
    forms trimers with three closely packed beta-sheets; possible link between the YjgF-like (d.79.1) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
    link to SUPERFAMILY database - Superfamily
  5. Family: IpsF-like [69766]
  6. Protein: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF [69767]
  7. Species: Escherichia coli [TaxId: 562] [69768]
    SQ P62617 ! SQ P36663

PDB Entry Domains:

  1. 1gx1 picpic
    complexed with cdf, mn, mse, so4, zn
    1. chain a [70675] picpiclink
    2. chain b [70676] picpiclink
    3. chain c [70677] picpiclink
  2. 1h47 picpic
    complexed with c5p, gpp, zn
    1. chain a [111615] picpiclink
    2. chain b [111616] picpiclink
    3. chain c [111617] picpiclink
    4. chain d [111618] picpiclink
    5. chain e [111619] picpiclink
    6. chain f [111620] picpiclink
  3. 1h48 picpic
    complexed with c5p, cdi, gpp, mn, zn
    1. chain a [111621] picpiclink
    2. chain b [111622] picpiclink
    3. chain c [111623] picpiclink
    4. chain d [111624] picpiclink
    5. chain e [111625] picpiclink
    6. chain f [111626] picpiclink
  4. 1jy8 picpic
    complexed with c, cdi, zn
    1. chain a [67452] picpiclink
  5. 2gzl picpic
    automatically matched to d1h48c_
    complexed with 2aa, gpp, zn
    1. region a:-1-157 [135909] picpiclink
  6. 1u3l picpic
    complexed with cdp, mg, zn
    1. chain a [107643] picpiclink
  7. 1u3p picpic
    complexed with zn3
    1. chain a [107644] picpiclink
  8. 1u40 picpic
    complexed with cdm, zn
    1. chain a [107647] picpiclink
  9. 1knk picpic
    complexed with mn
    1. chain a [72779] picpiclink
  10. 1knj picpic
    complexed with c5p, cdi, mn, mse
    1. chain a [72778] picpiclink
  11. 1u43 picpic
    complexed with sud
    1. chain a [107653] picpiclink

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk