Structural Classification of Proteins

Superfamily: IpsF-like

: forms trimers with three closely packed beta-sheets; possible link between the YjgF-like (d.79.1) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a+b) [53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold: Bacillus chorismate mutase-like [55297]
core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
Superfamily: IpsF-like [69765]
forms trimers with three closely packed beta-sheets; possible link between the YjgF-like (d.79.1) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
uperfamily

Families:

IpsF-like [69766] (5)
1. 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF [69767]
  1. Escherichia coli [TaxId: 562] [69768] (11)
    SQ P62617 ! SQ P36663
    1. 1gx1
      complexed with cdf, mn, mse, so4, zn
      1. chain a [70675]
      2. chain b [70676]
      3. chain c [70677]
    2. 1h47
      complexed with c5p, gpp, zn
      1. chain a [111615]
      2. chain b [111616]
      3. chain c [111617]
      4. chain d [111618]
      5. chain e [111619]
      6. chain f [111620]
    3. 1h48
      complexed with c5p, cdi, gpp, mn, zn
      1. chain a [111621]
      2. chain b [111622]
      3. chain c [111623]
      4. chain d [111624]
      5. chain e [111625]
      6. chain f [111626]
    4. 1jy8
      complexed with c, cdi, zn
      1. chain a [67452]
    5. 2gzl
      automatically matched to d1h48c_
      complexed with 2aa, gpp, zn
      1. region a:-1-157 [135909]
    6. 1u3l
      complexed with cdp, mg, zn
      1. chain a [107643]
    7. 1u3p
      complexed with zn3
      1. chain a [107644]
    8. 1u40
      complexed with cdm, zn
      1. chain a [107647]
    9. 1knk
      complexed with mn
      1. chain a [72779]
    10. 1knj
      complexed with c5p, cdi, mn, mse
      1. chain a [72778]
    11. 1u43
      complexed with sud
      1. chain a [107653]
  2. Haemophilus influenzae [TaxId: 727] [75479] (3)
    1. 1vh8
      structural genomics
      complexed with acy, pop
      1. chain a [100647]
      2. chain b [100648]
      3. chain c [100649]
      4. chain d [100650]
      5. chain e [100651]
      6. chain f [100652]
    2. 1vha
      structural genomics
      complexed with acy, mn, pop
      1. chain a [100655]
      2. chain b [100656]
      3. chain c [100657]
      4. chain d [100658]
      5. chain e [100659]
      6. chain f [100660]
    3. 1jn1
      structural genomics
      complexed with co, so4
      1. chain a [71754]
      2. chain b [71755]
      3. chain c [71756]
  3. Thermus thermophilus [TaxId: 274] [82720] (4)
    1. 1iv3
      complexed with mg; mutant
      1. chain a [76828]
      2. chain c [76830]
      3. chain d [76831]
      4. chain b [76829]
      5. chain e [76832]
      6. chain f [76833]
    2. 1iv4
      complexed with c5p, mg; mutant
      1. chain a [76834]
      2. chain c [76836]
      3. chain d [76837]
      4. chain b [76835]
      5. chain e [76838]
      6. chain f [76839]
    3. 1iv2
      complexed with cdp, mg; mutant
      1. chain a [76822]
      2. chain c [76824]
      3. chain d [76825]
      4. chain b [76823]
      5. chain e [76826]
      6. chain f [76827]
    4. 1iv1
      1. chain a [76816]
      2. chain c [76818]
      3. chain d [76819]
      4. chain b [76817]
      5. chain e [76820]
      6. chain f [76821]
  4. Shewanella oneidensis [TaxId: 70863] [118026] (1)
    SQ Q8EBR3
    1. 1t0a
      complexed with co, fpp, zn
      1. chain a [112192]
      2. chain b [112193]
      3. chain c [112194]
2. IspD/ispF bifunctional enzyme, MECDP synthase domain [118027]
  1. Campylobacter jejuni [TaxId: 197] [118028] (2)
    SQ Q9PM68
    1. 1w55
      complexed with c, edo, gpp, mg
      1. region a:208-370 [114198]
    2. 1w57
      complexed with c, gpp, zn
      1. region a:208-370 [114200]