Structural Classification of Proteins
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Family: tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: LigT-like [55143]
    duplication of beta-alpha-beta-alpha-beta motif: antiparallel beta sheet forms barrel (n=6, S=8) similar to the barrel of prokaryotic DNA topoisomerases I and III
  4. Superfamily: LigT-like [55144]
    link to SUPERFAMILY database - Superfamily
  5. Family: tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase [55145]

Protein Domains:

  1. tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase [55146]
    1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [55147] (3)
      1. 1jh6 picpic
        complexed with so4
        1. chain a [66707] picpiclink
        2. chain b [66708] picpiclink
      2. 1fsi picpic
        CASP4
        complexed with so4
        1. chain a [39536] picpiclink
        2. chain b [39537] picpiclink
        3. chain c [39538] picpiclink
      3. 1jh7 picpic
        complexed with so4, uvc
        1. chain a [66709] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk