Structural Classification of Proteins
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Family: GGDEF domain

Pfam 00990; less decorated than the adenylyl/guanylyl cyclase domain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ferredoxin-like [54861]
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily: Nucleotide cyclase [55073]
    common fold is elaborated with additional secondary structures
    link to SUPERFAMILY database - Superfamily
  5. Family: GGDEF domain [117984]
    Pfam 00990; less decorated than the adenylyl/guanylyl cyclase domain

Protein Domains:

  1. Response regulator PleD, C-terminal domain [117985]
    Diguanylate cyclase
    1. Caulobacter crescentus [TaxId: 155892] [117986] (3)
      SQ Q9A5I5
      1. 1w25 picpicxref
        complexed with 5gp, mg, zn
        1. region a:294-455 [114092] picpiclink
        2. region b:294-455 [114095] picpiclink
      2. 2v0n picpicxrefxrefxrefxref
        automatically matched to d1w25a3
        complexed with 5gp, bef, cl, gav, mg, so4
        1. region a:294-454 [152367] picpiclink
      3. 2v0n picpicxrefxrefxrefxref
        automatically matched to d1w25a3
        complexed with 5gp, bef, cl, gav, mg, so4
        1. region b:294-454 [152370] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk