Structural Classification of Proteins
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Family: Ferredoxin domains from multidomain proteins

members of this "family" may be more closely related to other ferredoxins than to each other

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ferredoxin-like [54861]
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily: 4Fe-4S ferredoxins [54862]
    link to SUPERFAMILY database - Superfamily
  5. Family: Ferredoxin domains from multidomain proteins [54884]
    members of this "family" may be more closely related to other ferredoxins than to each other

Protein Domains:

  1. Fe-only hydrogenase, second domain [54885]
    1. Clostridium pasteurianum [TaxId: 1501] [54886] (4) picpic
  2. Fe-only hydrogenase larger subunit, N-domain [54887]
    1. Desulfovibrio desulfuricans [TaxId: 876] [54888] (1) picpic
  3. Pyruvate-ferredoxin oxidoreductase, PFOR, domain V [54889]
    1. Desulfovibrio africanus [TaxId: 873] [54890] (17) picpic
  4. Dihydropyrimidine dehydrogenase, C-terminal domain [54891]
    includes linker from domain 4
    1. Pig (Sus scrofa) [TaxId: 9823] [54892] (5) picpic
  5. Adenylylsulfate reductase B subunit [69726]
    includes N-terminal partly folded tail
    1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [69727] (10) picpic
  6. Formate dehydrogenase N, iron-sulfur (beta) subunit [75427]
    1. Escherichia coli [TaxId: 562] [75428] (2) picpic
  7. Tungsten containing formate dehydrogenase, small subunit [82664]
    1. Desulfovibrio gigas [TaxId: 879] [82665] (1) picpic
  8. Respiratory nitrate reductase 1 beta chain [102955]
    1. Escherichia coli [TaxId: 562] [102956] (7) picpic
      SQ P11349
  9. Transhydroxylase beta subunit, BthL, N-terminal domain [110948]
    1. Pelobacter acidigallici [TaxId: 35816] [110949] (6) picpic
      SQ P80564
  10. NADH-quinone oxidoreductase chain 9, Nqo9 [143252]
    1. Thermus thermophilus [TaxId: 274] [143253] (4) picpic
      SQ Q56224 26-179
  11. NADH-quinone oxidoreductase chain 3, Nqo3, domain 2 [143254]
    1. Thermus thermophilus [TaxId: 274] [143255] (4) picpic
      SQ Q56223 96-246
  12. DsrB insert domain [160277]
    1. Desulfovibrio vulgaris [TaxId: 881] [160278] (2) picpic
      SQ P45575 209-277
    2. Archaeoglobus fulgidus [TaxId: 2234] [160279] (2) picpic
      SQ Q59110 197-261
  13. DsrA insert domain [160280]
    1. Desulfovibrio vulgaris [TaxId: 881] [160281] (2) picpic
      SQ P45574 242-322
    2. Archaeoglobus fulgidus [TaxId: 2234] [160282] (2) picpic
      SQ Q59109 240-305
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk