Structural Classification of Proteins
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Superfamily: Prokaryotic type KH domain (KH-domain type II)

Prokaryotic and eukaryotic domains share a KH-motif but have different topologies
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Alpha-lytic protease prodomain-like [54805]
    core: alpha-beta(2)-(alpha)-beta; 2 layers: alpha/beta
  4. Superfamily: Prokaryotic type KH domain (KH-domain type II) [54814]
    Prokaryotic and eukaryotic domains share a KH-motif but have different topologies
    link to SUPERFAMILY database - Superfamily

Families:

  1. Prokaryotic type KH domain (KH-domain type II) [54815] (9)
    1. Ribosomal protein S3 N-terminal domain [54816]
      1. Thermus thermophilus [TaxId: 274] [54817] (36) picpic
        SQ P80372
      2. Mouse (Mus musculus) [TaxId: 10090] [117914] (1) picpic
        SQ P23396 17-95
      3. Escherichia coli [TaxId: 562] [160236] (24) picpic
        SQ P0A7V3 1-105
      4. Canis lupus familiaris [TaxId: 9615] [160237] (1) picpic
    2. GTPase Era C-terminal domain [54818]
      1. Escherichia coli [TaxId: 562] [54819] (3) picpic
      2. Thermus thermophilus [TaxId: 274] [117915] (1) picpic
        SQ Q5SM23
    3. Transcription factor NusA, C-terminal domains [69701]
      duplication: tandem repeat of two type II KH-domains
      1. Thermotoga maritima [TaxId: 2336] [69702] (2) picpic
      2. Mycobacterium tuberculosis [TaxId: 1773] [69703] (7) picpic
    4. Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6 [54803]
      the type of KH-domain fold (II or I) adopted by this domain is not ascertained yet
      1. Streptomyces antibioticus [TaxId: 1890] [54804] (2) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk