Structural Classification of Proteins
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Family: Ribosomal S5 protein, N-terminal domain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: dsRBD-like [54767]
    alpha-beta(3)-alpha; 2 layers: alpha/beta
  4. Superfamily: dsRNA-binding domain-like [54768]
    link to SUPERFAMILY database - Superfamily
  5. Family: Ribosomal S5 protein, N-terminal domain [54778]

Protein Domains:

  1. Ribosomal S5 protein, N-terminal domain [54779]
    lacks the N-terminal helix
    1. Bacillus stearothermophilus [TaxId: 1422] [54780] (1)
      1. 1pkp picpicxref
        1. region a:4-77 [38787] picpiclink
    2. Thermus thermophilus [TaxId: 274] [54781] (36)
      SQ P27152
      1. 2uub picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with 6mz, cm0, k, mg, par, zn
        1. region e:5-73 [139937] picpiclink
      2. 1fjg picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, par, scm, sry, zn
        1. region e:5-73 [38789] picpiclink
      3. 1j5e picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with unx, zn
        1. region e:5-73 [71548] picpiclink
      4. 2uxc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with k, mg, par, zn
        1. region e:5-73 [140008] picpiclink
      5. 2uuc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with 6mz, cm0, k, mg, par, zn
        1. region e:5-73 [139957] picpiclink
      6. 2uua picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with 6mz, cm0, k, mg, par, zn
        1. region e:5-73 [139917] picpiclink
      7. 1xmq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, par, t6a, zn
        1. region e:5-73 [115534] picpiclink
      8. 1n32 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, par, psu, zn
        1. region e:5-73 [79874] picpiclink
      9. 2uu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with 6mz, cm0, k, mg, par, zn
        1. region e:5-73 [139897] picpiclink
      10. 1xnq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, par, zn
        1. region e:5-73 [115608] picpiclink
      11. 1xnr picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, par, zn
        1. region e:5-73 [115630] picpiclink
      12. 1hr0 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, zn
        1. region e:5-73 [38790] picpiclink
      13. 1hnz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with hyg, mg, zn
        1. region e:5-73 [38791] picpiclink
      14. 2j02 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with 5mu, mg, par, zn
        1. region e:5-73 [137870] picpiclink
      15. 2j00 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with 5mu, mg, par, zn
        1. region e:5-73 [137843] picpiclink
      16. 1xmo picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, mnu, par, t6a, zn
        1. region e:5-73 [115504] picpiclink
      17. 1hnw picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, tac, zn
        1. region e:5-73 [38792] picpiclink
      18. 2e5l picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with zn
        1. region e:5-73 [132029] picpiclink
      19. 1i94 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, wo2, zn
        1. region e:2-73 [61996] picpiclink
      20. 1hnx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, pcy, zn
        1. region e:5-73 [38793] picpiclink
      21. 1n33 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, par, psu, zn
        1. region e:5-73 [79896] picpiclink
      22. 2hhh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with ksg
        1. region e:5-73 [136481] picpiclink
      23. 1i96 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, wo2, zn
        1. region e:2-73 [62040] picpiclink
      24. 1n34 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with zn
        1. region e:5-73 [79918] picpiclink
      25. 1i97 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, tac, wo2, zn
        1. region e:2-73 [62063] picpiclink
      26. 1n36 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with zn
        1. region e:5-73 [79941] picpiclink
      27. 1i95 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with ede, mg, wo2, zn
        1. region e:2-73 [62018] picpiclink
      28. 2f4v picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with ab9, d2c, k, mg, zn
        1. region e:5-73 [132942] picpiclink
      29. 2hgp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        1. region h:5-73 [136425] picpiclink
      30. 2hgi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        1. region h:5-73 [136404] picpiclink
      31. 2hgr picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        1. region h:5-73 [136446] picpiclink
      32. 2ow8 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with 2mg, 4oc, 4su, 5mc, 5mu, 7mg, h2u, m2g, ma6, mia, psu, ur3
        1. region f:5-73 [139403] picpiclink
      33. 1yl4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        1. region h:5-73 [123601] picpiclink
      34. 2b64 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with psu, yyg
        1. region e:5-73 [127937] picpiclink
      35. 2b9o picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with psu, yyg
        1. region e:5-73 [128167] picpiclink
      36. 2b9m picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i94e2
        complexed with psu, yyg
        1. region e:5-73 [128130] picpiclink
    3. Escherichia coli [TaxId: 562] [160202] (24)
      SQ P0A7W1 9-77
      1. 2qal picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg, nmy
        1. region e:9-77 [150218] picpiclink
      2. 2qan picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg, nmy
        1. region e:9-77 [150272] picpiclink
      3. 2qbf picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg
        1. region e:9-77 [150492] picpiclink
      4. 2qbd picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg
        1. region e:9-77 [150438] picpiclink
      5. 1vs5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with ksg, mg
        1. region e:9-77 [144440] picpiclink
      6. 3df1 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with hyg, mg
        1. region e:9-77 [157607] picpiclink
      7. 3df3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with hyg, mg
        1. region e:9-77 [157661] picpiclink
      8. 1vs7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with ksg, mg
        1. region e:9-77 [144481] picpiclink
      9. 2qoy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg, nmy, scm
        1. region e:9-77 [151095] picpiclink
      10. 2qp0 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg, nmy, scm
        1. region e:9-77 [151148] picpiclink
      11. 2avy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        Representative structure
        complexed with mg
        1. region e:9-77 [144847] picpiclink
      12. 2aw7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg
        1. region e:9-77 [144890] picpiclink
      13. 2qb9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with lll, mg
        1. region e:9-77 [150332] picpiclink
      14. 2qbb picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with lll, mg
        1. region e:9-77 [150385] picpiclink
      15. 2i2p picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg
        1. region e:9-77 [145425] picpiclink
      16. 2i2u picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg
        1. region e:9-77 [145467] picpiclink
      17. 2qbh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with lll, mg
        1. region e:9-77 [150546] picpiclink
      18. 2qbj picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with lll, mg
        1. region e:9-77 [150600] picpiclink
      19. 2qou picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg, scm
        1. region e:9-77 [150989] picpiclink
      20. 2qow picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg, scm
        1. region e:9-77 [151042] picpiclink
      21. 2z4m picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg, par
        1. region e:9-77 [154110] picpiclink
      22. 2vho picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg
        1. region e:9-77 [153127] picpiclink
      23. 2z4k picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg, par
        1. region e:9-77 [154056] picpiclink
      24. 2vhp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2AVY E:9-77
        complexed with mg
        1. region e:9-77 [153149] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk