Structural Classification of Proteins
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Family: TRM1-like

Pfam 02005; contains extra C-terminal alpha+beta subdomain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: S-adenosyl-L-methionine-dependent methyltransferases [53334]
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. Superfamily: S-adenosyl-L-methionine-dependent methyltransferases [53335]
    link to SUPERFAMILY database - Superfamily
  5. Family: TRM1-like [159697]
    Pfam 02005; contains extra C-terminal alpha+beta subdomain

Protein Domains:

  1. N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 [159698]
    1. Pyrococcus horikoshii [TaxId: 53953] [159699] (5)
      SQ O59493 3-377
      1. 2dul picpic
        complexed with gol; mutant
        1. region a:3-377 [146588] picpiclink
      2. 2eju picpic
        automatically matched to 2DUL A:3-377
        complexed with gol, sah; mutant
        1. region a:3-377 [146881] picpiclink
      3. 2ejt picpic
        automatically matched to 2DUL A:3-377
        complexed with gol, sam; mutant
        1. region a:3-377 [146880] picpiclink
      4. 2ytz picpic
        automatically matched to 2DUL A:3-377
        complexed with sah, so4; mutant
        1. region a:3-377 [153776] picpiclink
      5. 2ytz picpic
        automatically matched to 2DUL A:3-377
        complexed with sah, so4; mutant
        1. region b:3-376 [153777] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk