Structural Classification of Proteins
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Superfamily: Zn-dependent exopeptidases

core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Phosphorylase/hydrolase-like [53162]
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. Superfamily: Zn-dependent exopeptidases [53187]
    core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest
    link to SUPERFAMILY database - Superfamily

Families:

  1. Pancreatic carboxypeptidases [53188] (10)
    1. Carboxypeptidase A [53189]
      1. Cow (Bos taurus) [TaxId: 9913] [53190] (30)
        1. 1m4l picpic
          high resolution structure
          complexed with zn
          1. chain a [78604] picpiclink
        2. 2ctb picpic
          complexed with zn
          1. chain a [33803] picpiclink
        3. 2ctc picpic
          complexed with lof, zn
          1. chain a [33802] picpiclink
        4. 1yme picpic
          complexed with zn
          1. chain a [33804] picpiclink
        5. 1f57 picpic
          complexed with zn
          1. chain a [33805] picpiclink
        6. 1zlh picpicxrefxref
          automatically matched to d1arl__
          complexed with zn
          1. region a:3-305 [125251] picpiclink
        7. 1ee3 picpic
          complexed with cd
          1. chain p [70128] picpiclink
        8. 1bav picpic
          complexed with bip, zn
          1. chain a [33806] picpiclink
          2. chain b [33807] picpiclink
          3. chain c [33808] picpiclink
          4. chain d [33809] picpiclink
        9. 1ell picpic
          complexed with cd
          1. chain p [70129] picpiclink
        10. 2rfh picpic
          automatically matched to d1arla_
          complexed with 23n, zn
          1. region a:1-307 [151995] picpiclink
        11. 1hee picpic
          complexed with lhy, zn
          1. chain a [65814] picpiclink
          2. chain b [65815] picpiclink
          3. chain d [65816] picpiclink
          4. chain e [65817] picpiclink
        12. 1hdu picpic
          complexed with ing, zn
          1. chain a [65810] picpiclink
          2. chain b [65811] picpiclink
          3. chain d [65812] picpiclink
          4. chain e [65813] picpiclink
        13. 1arm picpic
          complexed with cu, hg, trs
          1. chain a [33810] picpiclink
        14. 1elm picpic
          complexed with cd
          1. chain p [70130] picpiclink
        15. 5cpa picpic
          complexed with zn
          1. chain a [33811] picpiclink
        16. 1iy7 picpic
          complexed with cxa, zn
          1. chain a [76942] picpiclink
        17. 1arl picpic
          1. chain a [33812] picpiclink
        18. 1hdq picpic
          complexed with inf, zn
          1. chain a [65809] picpiclink
        19. 1cbx picpic
          complexed with bzs, zn
          1. chain a [33813] picpiclink
        20. 6cpa picpic
          complexed with zaf, zn
          1. chain a [33816] picpiclink
        21. 7cpa picpic
          complexed with fvf, zn
          1. chain a [33815] picpiclink
        22. 8cpa picpic
          complexed with agf, zn
          1. chain a [33817] picpiclink
        23. 2abz picpicxrefxrefxrefxref
          automatically matched to d1arl__
          complexed with zn; mutant
          1. region a:4-305 [126537] picpiclink
        24. 2abz picpicxrefxrefxrefxref
          automatically matched to d1arl__
          complexed with zn; mutant
          1. region b:3-305 [126538] picpiclink
        25. 1cps picpic
          complexed with cpm, zn
          1. chain a [33818] picpiclink
        26. 3cpa picpic
          complexed with zn
          1. chain a [33819] picpiclink
        27. 1pyt picpicxrefxrefxref
          complexed with ca, zn
          1. chain b [33820] picpiclink
        28. 4cpa picpicxrefxref
          complexed with zn
          1. chain a [33821] picpiclink
        29. 4cpa picpicxrefxref
          duplicate of 4CPA
          complexed with zn
          1. chain b [118682] picpiclink
        30. 1cpx picpic
          truncated beta form with two zinc ions in the active site
          complexed with oh, zn
          1. chain a [33814] picpiclink
      2. Pig (Sus scrofa) [TaxId: 9823] [53191] (1)
        1. 1pca picpicxref
          zymogen
          complexed with cit, zn
          1. region b:1-308 [33822] picpiclink
      3. Human (Homo sapiens) [TaxId: 9606] [53192] (7)
        1. 2bo9 picpicxrefxrefxrefxref
          Procarboxypeptidase A4
          complexed with acn, mpd, nag, val, zn
          1. region a:4-307 [128897] picpiclink
        2. 2bo9 picpicxrefxrefxrefxref
          automatically matched to 2BO9 A:4-307
          complexed with acn, mpd, nag, val, zn
          1. region c:4-307 [128900] picpiclink
        3. 2pcu picpic
          automatically matched to 2BO9 A:4-307
          complexed with asp, gol, nag, scn, zn
          1. region a:5-307 [139655] picpiclink
        4. 1dtd picpicxref
          complexed with glu, zn
          1. chain a [33823] picpiclink
        5. 1aye picpicxref
          procarboxypeptidase A2
          complexed with zn
          1. region a:1-309 [33824] picpiclink
        6. 2boa picpicxrefxref
          Procarboxypeptidase A4
          complexed with gol, nag, zn
          1. region a:1001-1309 [128903] picpiclink
        7. 2boa picpicxrefxref
          automatically matched to 2BOA A:1001-1309
          complexed with gol, nag, zn
          1. region b:1001-1309 [128905] picpiclink
      4. Cotton bollworm (Helicoverpa armigera) [TaxId: 29058] [75247] (1)
        1. 1jqg picpicxref
          complexed with zn
          1. region a:1-310 [71791] picpiclink
    2. Carboxypeptidase B [53193]
      1. Pig (Sus scrofa) [TaxId: 9823] [53194] (54)
        1. 1z5r picpic
          complexed with zn
          1. region a:6-308 [124488] picpiclink
        2. 1z5r picpic
          automatically matched to 1Z5R A:6-308
          complexed with zn
          1. region b:6-308 [124489] picpiclink
        3. 1z5r picpic
          automatically matched to 1Z5R A:6-308
          complexed with zn
          1. region c:6-308 [124490] picpiclink
        4. 2piy picpic
          automatically matched to d1z5ra1
          complexed with 528, zn
          1. region a:6-308 [149522] picpiclink
        5. 2piy picpic
          automatically matched to d1z5ra1
          complexed with 528, zn
          1. region b:6-308 [149523] picpiclink
        6. 2piy picpic
          automatically matched to d1z5ra1
          complexed with 528, zn
          1. region c:6-308 [149524] picpiclink
        7. 2jew picpic
          automatically matched to d1z5ra1
          complexed with 720, zn
          1. region a:6-308 [148025] picpiclink
        8. 2pj1 picpic
          automatically matched to d1z5ra1
          complexed with 578, zn
          1. region a:6-308 [149531] picpiclink
        9. 2pj1 picpic
          automatically matched to d1z5ra1
          complexed with 578, zn
          1. region b:6-308 [149532] picpiclink
        10. 2pj1 picpic
          automatically matched to d1z5ra1
          complexed with 578, zn
          1. region c:6-308 [149533] picpiclink
        11. 2pj5 picpic
          automatically matched to d1z5ra1
          complexed with 11b, zn
          1. region a:6-308 [149542] picpiclink
        12. 2pj5 picpic
          automatically matched to d1z5ra1
          complexed with 11b, zn
          1. region b:6-308 [149543] picpiclink
        13. 2pj5 picpic
          automatically matched to d1z5ra1
          complexed with 11b, zn
          1. region c:6-308 [149544] picpiclink
        14. 2pj3 picpic
          automatically matched to d1z5ra1
          complexed with 86a, zn
          1. region a:6-308 [149537] picpiclink
        15. 2pj3 picpic
          automatically matched to d1z5ra1
          complexed with 86a, zn
          1. region b:6-308 [149538] picpiclink
        16. 2pj3 picpic
          automatically matched to d1z5ra1
          complexed with 86a, zn
          1. region c:6-308 [149539] picpiclink
        17. 2pj9 picpic
          automatically matched to d1z5ra1
          complexed with 281, zn
          1. region a:6-308 [149552] picpiclink
        18. 2pjb picpic
          automatically matched to d1z5ra1
          complexed with 983, zn
          1. region a:6-308 [149556] picpiclink
        19. 2pjb picpic
          automatically matched to d1z5ra1
          complexed with 983, zn
          1. region b:6-308 [149557] picpiclink
        20. 2pjb picpic
          automatically matched to d1z5ra1
          complexed with 983, zn
          1. region c:6-308 [149558] picpiclink
        21. 2pj8 picpic
          automatically matched to d1z5ra1
          complexed with 17a, zn
          1. region a:6-308 [149549] picpiclink
        22. 2pj8 picpic
          automatically matched to d1z5ra1
          complexed with 17a, zn
          1. region b:6-308 [149550] picpiclink
        23. 2pj8 picpic
          automatically matched to d1z5ra1
          complexed with 17a, zn
          1. region c:6-308 [149551] picpiclink
        24. 2pja picpic
          automatically matched to d1z5ra1
          complexed with 33z, zn
          1. region a:6-308 [149553] picpiclink
        25. 2pja picpic
          automatically matched to d1z5ra1
          complexed with 33z, zn
          1. region b:6-308 [149554] picpiclink
        26. 2pja picpic
          automatically matched to d1z5ra1
          complexed with 33z, zn
          1. region c:6-308 [149555] picpiclink
        27. 2pj6 picpic
          automatically matched to d1z5ra1
          complexed with 059, zn
          1. region a:6-308 [149545] picpiclink
        28. 2pjc picpic
          automatically matched to d1z5ra1
          complexed with 343, zn
          1. region a:6-308 [149559] picpiclink
        29. 2pjc picpic
          automatically matched to d1z5ra1
          complexed with 343, zn
          1. region b:6-308 [149560] picpiclink
        30. 2pjc picpic
          automatically matched to d1z5ra1
          complexed with 343, zn
          1. region c:6-308 [149561] picpiclink
        31. 2pj0 picpic
          automatically matched to d1z5ra1
          complexed with 922, zn
          1. region a:6-308 [149528] picpiclink
        32. 2pj0 picpic
          automatically matched to d1z5ra1
          complexed with 922, zn
          1. region b:6-308 [149529] picpiclink
        33. 2pj0 picpic
          automatically matched to d1z5ra1
          complexed with 922, zn
          1. region c:6-308 [149530] picpiclink
        34. 2pj7 picpic
          automatically matched to d1z5ra1
          complexed with 235, zn
          1. region a:6-308 [149546] picpiclink
        35. 2pj7 picpic
          automatically matched to d1z5ra1
          complexed with 235, zn
          1. region b:6-308 [149547] picpiclink
        36. 2pj7 picpic
          automatically matched to d1z5ra1
          complexed with 235, zn
          1. region c:6-308 [149548] picpiclink
        37. 2piz picpic
          automatically matched to d1z5ra1
          complexed with 606, zn
          1. region a:6-308 [149525] picpiclink
        38. 2piz picpic
          automatically matched to d1z5ra1
          complexed with 606, zn
          1. region b:6-308 [149526] picpiclink
        39. 2piz picpic
          automatically matched to d1z5ra1
          complexed with 606, zn
          1. region c:6-308 [149527] picpiclink
        40. 1zg7 picpic
          automatically matched to 1Z5R A:6-308
          complexed with p20, zn
          1. region a:6-308 [125014] picpiclink
        41. 1zg7 picpic
          automatically matched to 1Z5R A:6-308
          complexed with p20, zn
          1. region b:6-308 [125015] picpiclink
        42. 1zg7 picpic
          automatically matched to 1Z5R A:6-308
          complexed with p20, zn
          1. region c:6-307 [125016] picpiclink
        43. 2pj2 picpic
          automatically matched to d1z5ra1
          complexed with 864, zn
          1. region a:6-308 [149534] picpiclink
        44. 2pj2 picpic
          automatically matched to d1z5ra1
          complexed with 864, zn
          1. region b:6-308 [149535] picpiclink
        45. 2pj2 picpic
          automatically matched to d1z5ra1
          complexed with 864, zn
          1. region c:6-308 [149536] picpiclink
        46. 2pj4 picpic
          automatically matched to d1z5ra1
          complexed with 414, zn
          1. region a:6-308 [149540] picpiclink
        47. 2pj4 picpic
          automatically matched to d1z5ra1
          complexed with 414, zn
          1. region b:6-308 [149541] picpiclink
        48. 1zg9 picpic
          automatically matched to 1Z5R A:6-308
          complexed with l06, zn
          1. region a:6-308 [125020] picpiclink
        49. 1zg9 picpic
          automatically matched to 1Z5R A:6-308
          complexed with l06, zn
          1. region b:6-308 [125021] picpiclink
        50. 1zg9 picpic
          automatically matched to 1Z5R A:6-308
          complexed with l06, zn
          1. region c:6-307 [125022] picpiclink
        51. 1zg8 picpic
          automatically matched to 1Z5R A:6-308
          complexed with l98, zn
          1. region a:6-308 [125017] picpiclink
        52. 1zg8 picpic
          automatically matched to 1Z5R A:6-308
          complexed with l98, zn
          1. region b:6-308 [125018] picpiclink
        53. 1zg8 picpic
          automatically matched to 1Z5R A:6-308
          complexed with l98, zn
          1. region c:6-308 [125019] picpiclink
        54. 1nsa picpicxref
          zymogen
          complexed with ben, zn
          1. region a:4-308 [33825] picpiclink
      2. Human (Homo sapiens) [TaxId: 9606] [75248] (2)
        1. 1kwm picpicxref
          zymogen
          complexed with cit, zn
          1. region a:4-309 [73079] picpiclink
          2. region b:4-309 [73081] picpiclink
        2. 1zli picpicxrefxref
          complexed with zn
          1. region a:5-309 [125252] picpiclink
      3. Cow (Bos taurus) [TaxId: 9913] [53195] (1)
        1. 1cpb picpic
          CA-atoms only
          1. chain a,b [33826] picpiclink
      4. Corn earworm (Helicoverpa zea) [TaxId: 7113] [142511] (2)
        SQ Q3T905 117-428
        1. 2c1c picpic
          complexed with y1, zn
          1. region a:7-309 [129630] picpiclink
        2. 2c1c picpic
          automatically matched to 2C1C A:7-309
          complexed with y1, zn
          1. region b:7-309 [129631] picpiclink
    3. Carboxypeptidase D, catalytic domain [53196]
      1. Crested duck (Lophonetta specularioides) [TaxId: 8836] [53197] (2)
        1. 1h8l picpicxref
          complexed with gem, man, nag, so4, zn
          1. region a:4-304 [65738] picpiclink
        2. 1qmu picpicxref
          complexed with man, nag, so4, zn
          1. region a:4-304 [33827] picpiclink
    4. Carboxypeptidase M, catalytic domain [102504]
      1. Human (Homo sapiens) [TaxId: 9606] [102505] (1)
        1. 1uwy picpicxref
          complexed with nag, zn
          1. region a:1-296 [100131] picpiclink
  2. Carboxypeptidase T [53198] (1)
    1. Carboxypeptidase T [53199]
      1. Thermoactinomyces vulgaris [TaxId: 2026] [53200] (1)
        1. 1obr picpic
          complexed with ca, so4, zn
          1. chain a [33828] picpiclink
  3. Leucine aminopeptidase, C-terminal domain [53201] (2)
    1. Leucine aminopeptidase, C-terminal domain [53202]
      1. Cow (Bos taurus) [TaxId: 9913] [53203] (9)
        1. 1lam picpicxref
          complexed with co3, mpd, zn
          1. region a:160-484 [33829] picpiclink
        2. 1lcp picpicxref
          complexed with mpd, plu, zn
          1. region a:160-484 [33830] picpiclink
          2. region b:160-484 [33831] picpiclink
        3. 2j9a picpicxref
          automatically matched to d1blle2
          complexed with ahy, cl, dms, mpd, zn
          1. region a:160-484 [138149] picpiclink
        4. 2ewb picpicxref
          automatically matched to d1blle2
          complexed with co3, mpd, na, zed, zn
          1. region a:160-484 [132452] picpiclink
        5. 1lan picpicxref
          complexed with mpd, zn
          1. region a:160-484 [33832] picpiclink
        6. 1bll picpicxref
          complexed with zn
          1. region e:160-484 [33833] picpiclink
        7. 1lap picpicxref
          complexed with zn
          1. region a:160-484 [33834] picpiclink
        8. 1bpn picpicxref
          complexed with zn
          1. region a:160-484 [33836] picpiclink
        9. 1bpm picpicxref
          complexed with mg, zn
          1. region a:160-484 [33835] picpiclink
      2. Escherichia coli, PepA [TaxId: 562] [75249] (1)
        1. 1gyt picpicxref
          complexed with cl, co3, zn
          1. region a:179-503 [70766] picpiclink
          2. region b:179-503 [70768] picpiclink
          3. region c:179-503 [70770] picpiclink
          4. region d:179-503 [70772] picpiclink
          5. region e:179-503 [70774] picpiclink
          6. region f:179-503 [70776] picpiclink
          7. region g:179-503 [70778] picpiclink
          8. region h:179-503 [70780] picpiclink
          9. region i:179-503 [70782] picpiclink
          10. region j:179-503 [70784] picpiclink
          11. region k:179-503 [70786] picpiclink
          12. region l:179-503 [70788] picpiclink
  4. Bacterial dinuclear zinc exopeptidases [53204] (19)
    1. Aminopeptidase [53205]
      1. Aeromonas proteolytica [TaxId: 671] [53206] (13)
        SQ Q01693
        synonym: Vibrio proteolyticus
        1. 1rtq picpic
          complexed with na, scn, zn
          1. chain a [97819] picpiclink
        2. 1lok picpic
          complexed with na, scn, trs, zn
          1. chain a [78122] picpiclink
        3. 2dea picpic
          automatically matched to d1amp__
          complexed with na, zn
          1. region a:1-291 [131429] picpiclink
        4. 1amp picpic
          complexed with zn
          1. chain a [33837] picpiclink
        5. 2anp picpic
          complexed with na, zn; mutant
          1. region a:1-291 [127056] picpiclink
        6. 1xry picpic
          automatically matched to d1amp__
          complexed with bes, zn
          1. region a:1-291 [122268] picpiclink
        7. 1cp6 picpic
          complexed with bub, zn
          1. chain a [33838] picpiclink
        8. 2iq6 picpic
          automatically matched to d1ampa_
          complexed with zn
          1. region a:1-291 [147771] picpiclink
        9. 1txr picpic
          complexed with bes, zn
          1. chain a [107430] picpiclink
        10. 1igb picpic
          complexed with ipo, zn
          1. chain a [33839] picpiclink
        11. 1ft7 picpic
          complexed with k, plu, zn
          1. chain a [33840] picpiclink
        12. 2nyq picpic
          automatically matched to d1ampa_
          complexed with zn
          1. region a:1-291 [148517] picpiclink
        13. 2prq picpic
          automatically matched to d1amp__
          complexed with co, trs
          1. region a:1-291 [139750] picpiclink
      2. Streptomyces griseus [TaxId: 1911] [53207] (11)
        1. 1tkj picpic
          automatically matched to d1cp7a_
          complexed with ca, med, zn
          1. region a:1-277 [119296] picpiclink
        2. 1xbu picpic
          automatically matched to d1cp7a_
          complexed with ca, ioy, zn
          1. region a:1-277 [121841] picpiclink
        3. 1tkf picpic
          automatically matched to d1cp7a_
          complexed with ca, zn
          1. region a:1-277 [119294] picpiclink
        4. 1tkh picpic
          automatically matched to d1cp7a_
          complexed with ca, zn
          1. region a:1-277 [119295] picpiclink
        5. 1tf9 picpic
          automatically matched to d1cp7a_
          complexed with ca, zn
          1. region a:1-277 [119231] picpiclink
        6. 1tf8 picpic
          automatically matched to d1cp7a_
          complexed with ca, trp, zn
          1. region a:1-277 [119230] picpiclink
        7. 1qq9 picpic
          complexed with ca, met, zn
          1. chain a [33841] picpiclink
        8. 1cp7 picpic
          complexed with ca, zn
          1. chain a [33842] picpiclink
        9. 1f2o picpic
          complexed with ca, leu, zn
          1. chain a [59625] picpiclink
        10. 1xjo picpic
          complexed with ca, mho, po4, zn
          1. chain a [33843] picpiclink
        11. 1f2p picpic
          complexed with ca, phe, zn
          1. chain a [59626] picpiclink
    2. Aminopeptidase PepV [82450]
      unspecific amino dipeptidase
      1. Lactobacillus delbrueckii [TaxId: 1584] [82451] (1)
        1. 1lfw picpicxref
          complexed with aep, zn
          1. region a:1-186,a:383-468 [77942] picpiclink
    3. Carboxypeptidase G2, catalytic domain [53208]
      1. Pseudomonas sp., strain rs-16 [TaxId: 306] [53209] (1)
        1. 1cg2 picpicxref
          complexed with zn
          1. region a:26-213,a:327-414 [33844] picpiclink
          2. region b:26-213,b:327-414 [33845] picpiclink
          3. region c:26-213,c:327-414 [33846] picpiclink
          4. region d:26-213,d:327-414 [33847] picpiclink
    4. Peptidase T (tripeptidase), catalytic domain [75250]
      1. Salmonella typhimurium [TaxId: 90371] [75251] (1)
        1. 1fno picpicxref
          complexed with mse, so4, zn2
          1. region a:1-207,a:321-408 [75841] picpiclink
      2. Escherichia coli [TaxId: 562] [102506] (1)
        1. 1vix picpicxref
          structural genomics
          complexed with so4, zn
          1. region a:-1-207,a:321-409 [100777] picpiclink
          2. region b:-1-207,b:321-408 [100779] picpiclink
    5. Peptidase-like beta-alanine synthase, catalytic domain [102507]
      1. Yeast (Saccharomyces kluyveri) [TaxId: 4934] [102508] (2)
        1. 1r3n picpicxref
          complexed with bib, zn
          1. region a:18-247,a:364-455 [96945] picpiclink
          2. region b:23-247,b:364-455 [96947] picpiclink
          3. region c:18-247,c:364-455 [96949] picpiclink
          4. region d:19-247,d:364-455 [96951] picpiclink
          5. region e:23-247,e:364-455 [96953] picpiclink
          6. region f:18-247,f:364-455 [96955] picpiclink
          7. region g:26-247,g:364-455 [96957] picpiclink
          8. region h:18-247,h:364-455 [96959] picpiclink
        2. 1r43 picpicxref
          complexed with bib, dtt, trs, zn
          1. region a:18-247,a:364-455 [96969] picpiclink
          2. region b:24-247,b:364-455 [96971] picpiclink
    6. Succinyl-diaminopimelate desuccinylase, catalytic domain [102509]
      1. Neisseria meningitidis [TaxId: 487] [102510] (1)
        1. 1vgy picpicxref
          structural genomics
          mutant
          1. region a:2-180,a:294-376 [100620] picpiclink
          2. region b:2-180,b:294-376 [100622] picpiclink
    7. Aminoacylase-1, catalytic domain [102511]
      1. Human (Homo sapiens) [TaxId: 9606] [102512] (1)
        1. 1q7l picpic
          catalytic domain only made of the two separate chains
          complexed with gly, zn; mutant
          1. chain a,b [96044] picpiclink
          2. chain c,d [96045] picpiclink
    8. Hypothetical protein YsdC, catalytic domain [102513]
      contains insert beta-barrel domain
      1. Bacillus subtilis [TaxId: 1423] [102514] (1)
        1. 1vhe picpicxref
          structural genomics
          complexed with zn
          1. region a:3-72,a:163-367 [100670] picpiclink
    9. Putative endoglucanase TM1048, catalytic domain [102515]
      contains insert beta-barrel domain
      1. Thermotoga maritima [TaxId: 2336] [102516] (1)
        1. 1vho picpicxref
          structural genomics
          complexed with cac, so4
          1. region a:3-69,a:153-333 [100695] picpiclink
    10. Frv operon protein FrvX, catalytic domain [117659]
      1. Pyrococcus horikoshii [TaxId: 53953] [117660] (3)
        SQ O59196 # PH1527
        1. 1y0y picpicxref
          automatically matched to 1Y0R A:164-351,A:6-72
          complexed with ati, zn
          1. region a:164-351,a:6-72 [122515] picpiclink
        2. 1y0r picpicxref
          complexed with ars, zn
          1. region a:164-351,a:6-72 [122511] picpiclink
        3. 1xfo picpicxref
          complexed with zn
          1. region a:6-72,a:164-353 [115266] picpiclink
          2. region b:6-72,b:164-353 [115268] picpiclink
          3. region c:6-72,c:164-353 [115270] picpiclink
          4. region d:6-72,d:164-353 [115272] picpiclink
    11. Probable aminopeptidase ApeA [117661]
      contains insert beta-barrel domain
      1. Borrelia burgdorferi [TaxId: 139] [117662] (1)
        SQ Q45055
        1. 1y7e picpicxref
          Structural genomics target; BB0366
          1. region a:4-100,a:234-458 [116533] picpiclink
    12. IAA-amino acid hydrolase, catalytic domain [117663]
      1. Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702] [117664] (2)
        SQ P54970 37-428
        1. 1xmb picpicxref
          structural genomics target
          1. region a:37-215,a:335-428 [115479] picpiclink
        2. 2q43 picpicxref
          automatically matched to d1xmba1
          1. region a:16-194,a:314-407 [139821] picpiclink
    13. Deblocking aminopeptidase YhfE [142512]
      contains insert beta-barrel domain
      1. Bacillus cereus [TaxId: 1396] [142513] (16)
        SQ Q81HB5 3-73,187-348
        BC0901
        1. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          complexed with so4
          1. region a:3-73,a:187-348 [135529] picpiclink
        2. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region b:3-73,b:187-348 [135531] picpiclink
        3. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region c:3-73,c:187-348 [135533] picpiclink
        4. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region d:4-73,d:187-348 [135535] picpiclink
        5. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region e:3-73,e:187-348 [135537] picpiclink
        6. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region f:3-73,f:187-348 [135539] picpiclink
        7. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region g:4-73,g:187-348 [135541] picpiclink
        8. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region h:3-73,h:187-348 [135543] picpiclink
        9. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region i:4-73,i:187-348 [135545] picpiclink
        10. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region j:3-73,j:187-348 [135547] picpiclink
        11. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region k:3-73,k:187-348 [135549] picpiclink
        12. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region l:3-73,l:187-348 [135551] picpiclink
        13. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region m:3-73,m:187-348 [135553] picpiclink
        14. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region n:3-73,n:187-348 [135555] picpiclink
        15. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region o:5-73,o:187-348 [135557] picpiclink
        16. 2gre picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2GRE A:3-73,A:187-348
          complexed with so4
          1. region p:3-73,p:187-348 [135559] picpiclink
    14. Allantoate amidohydrolase AllC catalytic domain [142514]
      1. Escherichia coli [TaxId: 562] [142515] (4)
        SQ P77425 2-210,328-411
        1. 1z2l picpicxrefxref
          complexed with 1al, so4, zn
          1. region a:4-212,a:330-413 [124383] picpiclink
        2. 1z2l picpicxrefxref
          automatically matched to 1Z2L A:4-212,A:330-413
          complexed with 1al, so4, zn
          1. region b:4-212,b:330-412 [124385] picpiclink
        3. 2imo picpicxrefxref
          automatically matched to 1Z2L A:4-212,A:330-413
          1. region a:4-212,a:330-413 [137515] picpiclink
        4. 2imo picpicxrefxref
          automatically matched to 1Z2L A:4-212,A:330-413
          1. region b:4-212,b:330-413 [137517] picpiclink
    15. Endoglucanase TM1049 [142516]
      1. Thermotoga maritima [TaxId: 2336] [142517] (1)
        SQ Q9X0D9 1-64,149-339
        1. 2fvg picpicxref
          complexed with edo
          1. region a:1-64,a:149-339 [134202] picpiclink
    16. Protein YxeP [142518]
      1. Bacillus subtilis [TaxId: 1423] [142519] (2)
        SQ P54955 4-177,293-379
        1. 1ysj picpicxrefxref
          complexed with ni; mutant
          1. region a:4-177,a:293-379 [123975] picpiclink
        2. 1ysj picpicxrefxref
          automatically matched to 1YSJ A:4-177,A:293-379
          complexed with ni; mutant
          1. region b:4-177,b:293-379 [123977] picpiclink
    17. Aminopeptidase YpdE [142520]
      1. Shigella flexneri [TaxId: 623] [142521] (6)
        SQ Q83K87 1-66,148-345
        hypothetical protein SF2450 (PDB)/SF2449.1 (UniProt)
        1. 1ylo picpicxrefxrefxrefxrefxrefxref
          complexed with zn
          1. region a:1-66,a:148-345 [123660] picpiclink
        2. 1ylo picpicxrefxrefxrefxrefxrefxref
          automatically matched to 1YLO A:1-66,A:148-345
          complexed with zn
          1. region b:1-66,b:148-345 [123662] picpiclink
        3. 1ylo picpicxrefxrefxrefxrefxrefxref
          automatically matched to 1YLO A:1-66,A:148-345
          complexed with zn
          1. region c:1-66,c:148-345 [123664] picpiclink
        4. 1ylo picpicxrefxrefxrefxrefxrefxref
          automatically matched to 1YLO A:1-66,A:148-345
          complexed with zn
          1. region d:1-66,d:148-345 [123666] picpiclink
        5. 1ylo picpicxrefxrefxrefxrefxrefxref
          automatically matched to 1YLO A:1-66,A:148-345
          complexed with zn
          1. region e:1-66,e:148-345 [123668] picpiclink
        6. 1ylo picpicxrefxrefxrefxrefxrefxref
          automatically matched to 1YLO A:1-66,A:148-345
          complexed with zn
          1. region f:1-66,f:148-345 [123670] picpiclink
  5. FolH catalytic domain-like [53210] (2)
    1. Transferrin receptor ectodomain, protease-like domain [53211]
      1. Human (Homo sapiens) [TaxId: 9606] [53212] (4)
        1. 1de4 picpicxrefxrefxrefxrefxref
          1. region c:122-189,c:383-608 [33848] picpiclink
          2. region f:122-189,f:383-608 [33849] picpiclink
          3. region i:122-189,i:383-608 [33850] picpiclink
        2. 1cx8 picpicxrefxref
          complexed with nag, sm
          1. region a:122-189,a:383-608 [33851] picpiclink
          2. region b:122-189,b:383-608 [33852] picpiclink
          3. region c:122-189,c:383-608 [33853] picpiclink
          4. region d:122-189,d:383-608 [33854] picpiclink
          5. region e:122-189,e:383-608 [33855] picpiclink
          6. region f:122-189,f:383-608 [33856] picpiclink
          7. region g:122-189,g:383-608 [33857] picpiclink
          8. region h:122-189,h:383-608 [33858] picpiclink
        3. 2nsu picpicxrefxrefxrefxref
          automatically matched to d1cx8a3
          1. region a:122-189,a:383-608 [138548] picpiclink
        4. 2nsu picpicxrefxrefxrefxref
          automatically matched to d1cx8a3
          1. region b:122-189,b:383-608 [138551] picpiclink
    2. Glutamate carboxypeptidase II FOLH1 [142522]
      Folate hydrolase 1, FolH homologue
      1. Human (Homo sapiens) [TaxId: 9606] [142523] (17)
        SQ Q04609 57-117,351-593
        1. 3bi1 picpicxrefxref
          automatically matched to d1z8la3
          complexed with 3bi, bma, ca, cl, man, nag, zn
          1. region a:57-117,a:351-593 [155297] picpiclink
        2. 3bhx picpicxrefxref
          automatically matched to d1z8la3
          complexed with bhx, bma, ca, cl, man, nag, zn
          1. region a:57-117,a:351-593 [155291] picpiclink
        3. 2or4 picpicxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with bma, ca, cl, man, nag, qus, zn
          1. region a:57-117,a:351-593 [139260] picpiclink
        4. 3bi0 picpicxrefxref
          automatically matched to d1z8la3
          complexed with bix, bma, ca, cl, man, nag, zn
          1. region a:57-117,a:351-593 [155294] picpiclink
        5. 2pvw picpicxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with bma, ca, cl, g88, man, nag, zn
          1. region a:57-117,a:351-593 [139757] picpiclink
        6. 2oot picpicxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with bma, ca, cl, man, nag, zn
          1. region a:57-117,a:351-593 [139178] picpiclink
        7. 2c6c picpicxrefxref
          complexed with 24i, ca, cl, man, nag, zn
          1. region a:57-117,a:351-593 [129991] picpiclink
        8. 2pvv picpicxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with ca, cl, man, nag, ose, zn
          1. region a:57-117,a:351-593 [139754] picpiclink
        9. 2c6g picpicxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with bma, ca, cl, glu, man, nag, zn
          1. region a:57-117,a:351-593 [129994] picpiclink
        10. 2jbj picpicxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with bma, ca, cl, g88, man, nag, zn
          1. region a:57-117,a:351-593 [138252] picpiclink
        11. 2cij picpicxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with bma, ca, cl, man, met, nag, zn
          1. region a:57-117,a:351-593 [130495] picpiclink
        12. 2c6p picpicxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with bma, ca, cl, nag, po4, zn
          1. region a:57-117,a:351-593 [130003] picpiclink
        13. 2jbk picpicxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with bma, ca, cl, man, nag, qus, zn
          1. region a:57-117,a:351-593 [138255] picpiclink
        14. 1z8l picpicxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with nag, ndg, zn
          1. region a:57-117,a:351-593 [124708] picpiclink
        15. 1z8l picpicxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with nag, ndg, zn
          1. region b:57-117,b:351-593 [124711] picpiclink
        16. 1z8l picpicxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with nag, ndg, zn
          1. region c:57-117,c:351-593 [124714] picpiclink
        17. 1z8l picpicxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2C6C A:57-117,A:351-593
          complexed with nag, ndg, zn
          1. region d:57-117,d:351-593 [124717] picpiclink
  6. N-acetylmuramoyl-L-alanine amidase-like [102517] (2)
    1. N-acetylmuramoyl-L-alanine amidase CwlV [102518]
      1. Paenibacillus polymyxa [TaxId: 1406] [102519] (1)
        1. 1jwq picpic
          complexed with zn
          1. chain a [90921] picpiclink
    2. Endolysin Ply, catalytic domain [142524]
      1. Bacteriophage Psa [TaxId: 171618] [142525] (1)
        SQ Q8W5Y8 1-180
        1. 1xov picpicxref
          complexed with cl, glu, lys, so4, trs, zn
          1. region a:1-180 [122207] picpiclink
  7. AstE/AspA-like [142526] (6)
    Pfam 04952; Succinylglutamate desuccinylase / Aspartoacylase family; contains extra C-terminal domain, new variant of the Barrel-sandwich hybrid fold (scop_cf 51229)
    1. Succinylglutamate desuccinylase AstE [142527]
      1. Vibrio cholerae [TaxId: 666] [142528] (1)
        SQ Q9KSL4 3-342
        1. 2g9d picpic
          1. region a:3-342 [134798] picpiclink
      2. Vibrio parahaemolyticus [TaxId: 670] [142529] (2)
        SQ Q87Q40 4-342
        1. 2bco picpic
          complexed with zn
          1. region a:4-342 [128302] picpiclink
        2. 2bco picpic
          automatically matched to 2BCO A:4-342
          complexed with zn
          1. region b:4-342 [128303] picpiclink
      3. Escherichia coli [TaxId: 562] [142530] (2)
        SQ P76215 1-322
        1. 1yw6 picpic
          complexed with so4
          1. region a:1-322 [124132] picpiclink
        2. 1yw6 picpic
          automatically matched to 1YW6 A:1-322
          complexed with so4
          1. region b:1-322 [124133] picpiclink
      4. Chromobacterium violaceum [TaxId: 536] [142531] (1)
        SQ Q7NU26 2-332
        1. 1yw4 picpic
          complexed with zn
          1. region a:2-332 [124131] picpiclink
    2. Aspartoacylase AspA [159649]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [159650] (1)
        SQ Q6AZ03 4-310
        1. 2gu2 picpic
          complexed with so4, zn
          1. region a:4-310 [147177] picpiclink
      2. Human (Homo sapiens) [TaxId: 9606] [159651] (1)
        SQ P45381 9-310
        1. 2i3c picpic
          complexed with po4, zn
          1. region a:9-310 [147498] picpiclink
  8. Glutaminyl-peptide cyclotransferase-like [142532] (1)
    part of Pfam 04389
    1. Glutaminyl-peptide cyclotransferase, QPCT [142533]
      Glutaminyl cyclase
      1. Human (Homo sapiens) [TaxId: 9606] [142534] (16)
        SQ Q16769 33-361
        1. 2afw picpic
          automatically matched to 2AFM A:33-361
          complexed with ahn, so4, zn
          1. region a:33-361 [126707] picpiclink
        2. 2afw picpic
          automatically matched to 2AFM A:33-361
          complexed with ahn, so4, zn
          1. region b:33-361 [126708] picpiclink
        3. 2afx picpic
          automatically matched to 2AFM A:33-361
          complexed with 1bn, so4, zn
          1. region a:33-361 [126709] picpiclink
        4. 2afx picpic
          automatically matched to 2AFM A:33-361
          complexed with 1bn, so4, zn
          1. region b:33-361 [126710] picpiclink
        5. 2afm picpic
          complexed with so4, zn
          1. region a:33-361 [126698] picpiclink
        6. 2afm picpic
          automatically matched to 2AFM A:33-361
          complexed with so4, zn
          1. region b:33-361 [126699] picpiclink
        7. 2afz picpic
          automatically matched to 2AFM A:33-361
          complexed with nvi, so4, zn
          1. region a:33-361 [126712] picpiclink
        8. 2afz picpic
          automatically matched to 2AFM A:33-361
          complexed with nvi, so4, zn
          1. region b:33-361 [126713] picpiclink
        9. 2zeh picpic
          automatically matched to d2afua1
          complexed with so4, zn; mutant
          1. region a:33-361 [154403] picpiclink
        10. 2zeh picpic
          automatically matched to d2afua1
          complexed with so4, zn; mutant
          1. region b:33-361 [154404] picpiclink
        11. 2afs picpic
          complexed with so4, zn; mutant
          1. region a:33-361 [126702] picpiclink
        12. 2afu picpic
          complexed with bgt, zn
          1. region a:33-361 [126705] picpiclink
        13. 2afs picpic
          automatically matched to 2AFS A:33-361
          complexed with so4, zn; mutant
          1. region b:33-361 [126703] picpiclink
        14. 2afu picpic
          automatically matched to 2AFU A:33-361
          complexed with bgt, zn
          1. region b:33-361 [126706] picpiclink
        15. 2afo picpic
          automatically matched to 2AFM A:33-361
          complexed with so4, zn
          1. region a:33-361 [126700] picpiclink
        16. 2afo picpic
          automatically matched to 2AFM A:33-361
          complexed with so4, zn
          1. region b:33-361 [126701] picpiclink
  9. FGase-like [159652] (2)
    Pfam 05013; N-formylglutamate amidohydrolase
    1. N-formylglutamate amidohydrolase [159653]
      1. Ralstonia eutropha [TaxId: 106590] [159654] (2)
        SQ Q46VW8 10-289
        1. 2q7s picpic
          complexed with zn
          1. region a:10-289 [150103] picpiclink
        2. 2q7s picpic
          automatically matched to 2Q7S A:10-289
          complexed with zn
          1. region b:10-289 [150104] picpiclink
    2. Hypothetical protein Atu2144 [159655]
      1. Agrobacterium tumefaciens [TaxId: 358] [159656] (8)
        SQ Q8UDI1 6-257
        1. 2odf picpic
          complexed with so4
          1. region a:6-257 [148741] picpiclink
        2. 2odf picpic
          automatically matched to 2ODF A:6-257
          complexed with so4
          1. region b:6-256 [148742] picpiclink
        3. 2odf picpic
          automatically matched to 2ODF A:6-257
          complexed with so4
          1. region c:7-255 [148743] picpiclink
        4. 2odf picpic
          automatically matched to 2ODF A:6-257
          complexed with so4
          1. region d:7-256 [148744] picpiclink
        5. 2odf picpic
          automatically matched to 2ODF A:6-257
          complexed with so4
          1. region e:6-256 [148745] picpiclink
        6. 2odf picpic
          automatically matched to 2ODF A:6-257
          complexed with so4
          1. region f:6-256 [148746] picpiclink
        7. 2odf picpic
          automatically matched to 2ODF A:6-257
          complexed with so4
          1. region g:7-256 [148747] picpiclink
        8. 2odf picpic
          automatically matched to 2ODF A:6-257
          complexed with so4
          1. region h:6-256 [148748] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk