Structural Classification of Proteins
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Protein: N-terminal exonuclease domain of the epsilon subunit of DNA polymerase III from Escherichia coli [TaxId: 562]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Ribonuclease H-like motif [53066]
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. Superfamily: Ribonuclease H-like [53098]
    consists of one domain of this fold
    link to SUPERFAMILY database - Superfamily
  5. Family: DnaQ-like 3'-5' exonuclease [53118]
    contains Pfam 00929
  6. Protein: N-terminal exonuclease domain of the epsilon subunit of DNA polymerase III [82444]
  7. Species: Escherichia coli [TaxId: 562] [82445]

PDB Entry Domains:

  1. 2gui picpic
    automatically matched to d1j53a_
    complexed with egl, mn, peg, u5p
    1. region a:7-180 [135737] picpiclink
  2. 1j54 picpic
    complexed with egl, mn, tmp
    1. chain a [77077] picpiclink
  3. 1j53 picpic
    complexed with egl, mn, tmp
    1. chain a [77076] picpiclink
  4. 2ido picpicxrefxref
    automatically matched to d1j53a_
    complexed with edo, mn, tmp
    1. region a:7-180 [137284] picpiclink
  5. 2ido picpicxrefxref
    automatically matched to d1j53a_
    complexed with edo, mn, tmp
    1. region c:7-180 [137286] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk