Structural Classification of Proteins
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Family: phosphatase domain of polynucleotide kinase

no insertion subdomains

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: HAD-like [56783]
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
  4. Superfamily: HAD-like [56784]
    usually contains an insertion (sub)domain after strand 1
    link to SUPERFAMILY database - Superfamily
  5. Family: phosphatase domain of polynucleotide kinase [82385]
    no insertion subdomains

Protein Domains:

  1. Polynucleotide kinase, phosphatase domain [82386]
    1. Bacteriophage T4 [TaxId: 10665] [82387] (16)
      1. 1ltq picpicxref
        complexed with adp, dms, mse
        1. region a:153-301 [78208] picpiclink
      2. 1rrc picpicxref
        complexed with adp, ca, dms
        1. region a:153-301 [97789] picpiclink
      3. 1rc8 picpicxref
        complexed with adp, ca, dms
        1. region a:153-301 [97291] picpiclink
      4. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        1. region a:153-301 [137133] picpiclink
      5. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        1. region b:153-301 [137135] picpiclink
      6. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        1. region c:153-301 [137137] picpiclink
      7. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        1. region d:153-301 [137139] picpiclink
      8. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        1. region e:153-301 [137141] picpiclink
      9. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        1. region f:153-301 [137143] picpiclink
      10. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        1. region g:153-301 [137145] picpiclink
      11. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        1. region h:153-301 [137147] picpiclink
      12. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        1. region i:153-301 [137149] picpiclink
      13. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        1. region j:153-301 [137151] picpiclink
      14. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        1. region k:153-301 [137153] picpiclink
      15. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ltqa1
        complexed with ars, mg, so4
        1. region l:153-301 [137155] picpiclink
      16. 1rpz picpicxref
        complexed with adp, ca, dms
        1. region a:153-301 [97720] picpiclink
  2. 5' polynucleotide kinase-3' phosphatase, middle domain [142154]
    1. Mouse (Mus musculus) [TaxId: 10090] [142155] (2)
      SQ Q9JLV6 144-338
      1. 1yj5 picpicxrefxrefxref
        complexed with so4
        1. region a:144-338 [123380] picpiclink
      2. 1yj5 picpicxrefxrefxref
        automatically matched to 1YJ5 A:144-338
        complexed with so4
        1. region b:144-338 [123382] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk