Structural Classification of Proteins
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Protein: Nicotinamide nucleotide transhydrogenase dI component from Rhodospirillum rubrum [TaxId: 1085]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: NAD(P)-binding Rossmann-fold domains [51734]
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. Superfamily: NAD(P)-binding Rossmann-fold domains [51735]
    link to SUPERFAMILY database - Superfamily
  5. Family: Formate/glycerate dehydrogenases, NAD-domain [51830]
    this domain interrupts the other domain which defines family
  6. Protein: Nicotinamide nucleotide transhydrogenase dI component [63937]
    L-alanine dehydrogenase homologue
  7. Species: Rhodospirillum rubrum [TaxId: 1085] [63938]

PDB Entry Domains:

  1. 1l7d picpicxref
    1. region a:144-326 [77774] picpiclink
    2. region b:544-726 [77776] picpiclink
    3. region c:944-1126 [77778] picpiclink
    4. region d:1344-1526 [77780] picpiclink
  2. 1f8g picpicxref
    complexed with nad
    1. region a:144-326 [59695] picpiclink
    2. region b:144-326 [59697] picpiclink
    3. region c:144-326 [59699] picpiclink
    4. region d:144-326 [59701] picpiclink
  3. 2fsv picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with gol, nad, nap; mutant
    1. region a:144-326 [134037] picpiclink
  4. 2fsv picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with gol, nad, nap; mutant
    1. region b:144-326 [134039] picpiclink
  5. 1l7e picpicxref
    complexed with nai
    1. region a:144-326 [77782] picpiclink
    2. region b:544-726 [77784] picpiclink
    3. region c:944-1126 [77786] picpiclink
    4. region d:1344-1526 [77788] picpiclink
  6. 1u2g picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with apr, gol, ndp
    1. region a:144-326 [119480] picpiclink
  7. 1u2g picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with apr, gol, ndp
    1. region b:144-326 [119482] picpiclink
  8. 2oor picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with gol, nad, txp
    1. region a:144-326 [139171] picpiclink
  9. 2oor picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with gol, nad, txp
    1. region b:144-326 [139173] picpiclink
  10. 1u28 picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with gol, nad, nap
    1. region a:144-326 [119468] picpiclink
  11. 1u28 picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with gol, nad, nap
    1. region b:144-326 [119470] picpiclink
  12. 2oo5 picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with nap, so4, txd
    1. region a:144-326 [139162] picpiclink
  13. 2oo5 picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with nap, so4, txd
    1. region b:144-326 [139164] picpiclink
  14. 2fr8 picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with nad, nap; mutant
    1. region a:144-326 [133973] picpiclink
  15. 2fr8 picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with nad, nap; mutant
    1. region b:144-326 [133975] picpiclink
  16. 1ptj picpicxrefxref
    complexed with dIII component
    complexed with gol, nap, snd
    1. region a:144-326 [95099] picpiclink
    2. region b:144-326 [95101] picpiclink
  17. 1nm5 picpicxrefxref
    complexed with dIII component
    complexed with gol, nad, nap; mutant
    1. region a:144-326 [91968] picpiclink
    2. region b:144-326 [91970] picpiclink
  18. 1hzz picpicxrefxref
    complexed with dIII component
    complexed with nad, nap
    1. region a:144-326 [61470] picpiclink
    2. region b:144-326 [61472] picpiclink
  19. 1u2d picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with gol, nad, ndp
    1. region a:144-326 [119475] picpiclink
  20. 1u2d picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with gol, nad, ndp
    1. region b:144-326 [119477] picpiclink
  21. 2frd picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with nad, nap; mutant
    1. region a:144-326 [133980] picpiclink
  22. 2frd picpicxrefxrefxref
    automatically matched to d1f8ga1
    complexed with nad, nap; mutant
    1. region b:144-326 [133982] picpiclink
  23. 1xlt picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1f8ga1
    complexed with na, nad, ndp, suc
    1. region a:144-326 [122122] picpiclink
  24. 1xlt picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1f8ga1
    complexed with na, nad, ndp, suc
    1. region b:144-326 [122124] picpiclink
  25. 1xlt picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1f8ga1
    complexed with na, nad, ndp, suc
    1. region d:144-326 [122127] picpiclink
  26. 1xlt picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1f8ga1
    complexed with na, nad, ndp, suc
    1. region e:144-326 [122129] picpiclink
  27. 1xlt picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1f8ga1
    complexed with na, nad, ndp, suc
    1. region g:144-326 [122132] picpiclink
  28. 1xlt picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1f8ga1
    complexed with na, nad, ndp, suc
    1. region h:144-326 [122134] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk