Structural Classification of Proteins
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Protein: 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) from Aquifex aeolicus [TaxId: 63363]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Aldolase [51569]
    Common fold covers whole protein structure
    link to SUPERFAMILY database - Superfamily
  5. Family: Class I DAHP synthetase [51599]
  6. Protein: 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) [51602]
  7. Species: Aquifex aeolicus [TaxId: 63363] [63922]

PDB Entry Domains:

  1. 2a21 picpic
    automatically matched to d1pe1a_
    complexed with pep, po4, zn
    1. region a:1002-1264 [126023] picpiclink
  2. 2a21 picpic
    automatically matched to d1pe1a_
    complexed with pep, po4, zn
    1. region b:2003-2264 [126024] picpiclink
  3. 1pe1 picpic
    complexed with 2pg, cd, po4
    1. chain a [94591] picpiclink
    2. chain b [94592] picpiclink
  4. 1lrq picpic
    complexed with a5p, cd, pep, po4; mutant
    1. chain a [78163] picpiclink
    2. chain b [78164] picpiclink
  5. 1lro picpic
    complexed with cd, pep, po4; mutant
    1. chain a [78161] picpiclink
    2. chain b [78162] picpiclink
  6. 1jcx picpic
    complexed with cd, pai
    1. chain a [66510] picpiclink
    2. chain b [66511] picpiclink
  7. 1pck picpic
    complexed with cd, pez, po4
    1. chain a [94438] picpiclink
    2. chain b [94439] picpiclink
  8. 1fxq picpic
    complexed with a5p, pep
    1. chain a [60108] picpiclink
    2. chain b [60109] picpiclink
  9. 1pcw picpic
    complexed with cd, h4p
    1. chain a [94495] picpiclink
    2. chain b [94496] picpiclink
  10. 1fxp picpic
    complexed with cd, po4
    1. chain a [60106] picpiclink
    2. chain b [60107] picpiclink
  11. 1fws picpic
    complexed with cd, pep, po4
    1. chain a [60063] picpiclink
    2. chain b [60064] picpiclink
  12. 1fww picpic
    complexed with a5p, cd, pep, po4
    1. chain a [60067] picpiclink
    2. chain b [60068] picpiclink
  13. 1jcy picpic
    complexed with cd, pep, po4, r5p
    1. chain a [66512] picpiclink
    2. chain b [66513] picpiclink
  14. 1fwt picpic
    complexed with cd, e4p, pep, po4
    1. chain a [60065] picpiclink
    2. chain b [60066] picpiclink
  15. 2a2i picpic
    automatically matched to d1pe1a_
    complexed with a5p, pep, zn
    1. region a:1002-1264 [126031] picpiclink
  16. 2a2i picpic
    automatically matched to d1pe1a_
    complexed with a5p, pep, zn
    1. region b:2003-2264 [126032] picpiclink
  17. 1fy6 picpic
    complexed with a5p, cd, po4
    1. chain a [60111] picpiclink
    2. chain b [60112] picpiclink
  18. 1fwn picpic
    complexed with pep, po4
    1. chain a [60060] picpiclink
    2. chain b [60061] picpiclink
  19. 1lrn picpic
    complexed with cd, po4; mutant
    1. chain a [78159] picpiclink
    2. chain b [78160] picpiclink
  20. 1fx6 picpic
    complexed with po4
    1. chain a [60086] picpiclink
    2. chain b [60087] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk