Structural Classification of Proteins
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Protein: Putative deoxyribonuclease YjjV from Escherichia coli [TaxId: 562]

SQ P39408 1-259

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Metallo-dependent hydrolases [51556]
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
    link to SUPERFAMILY database - Superfamily
  5. Family: TatD Mg-dependent DNase-like [82267]
  6. Protein: Putative deoxyribonuclease YjjV [141813]
  7. Species: Escherichia coli [TaxId: 562] [141814]
    SQ P39408 1-259

PDB Entry Domains:

  1. 1zzm picpic
    complexed with p33, zn
    1. region a:1-259 [125911] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk