Structural Classification of Proteins
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Family: Single strand DNA-binding domain, SSB

barrel, closed; n=5, S=10

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: OB-fold [50198]
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. Superfamily: Nucleic acid-binding proteins [50249]
    link to SUPERFAMILY database - Superfamily
  5. Family: Single strand DNA-binding domain, SSB [50263]
    barrel, closed; n=5, S=10

Protein Domains:

  1. ssDNA-binding protein [50264]
    1. Human (Homo sapiens), mitochondria [TaxId: 9606] [50265] (4) picpic
      SQ Q04837
    2. Escherichia coli [TaxId: 562] [50266] (5) picpic
      SQ P02339
    3. Mycobacterium tuberculosis [TaxId: 1773] [101760] (4) picpic
    4. Deinococcus radiodurans [TaxId: 1299] [110194] (1) picpic
      SQ Q9RY51
  2. Archaeal ssDNA-binding protein [89324]
    similar to the domains of the Replication protein A
    1. Archaeon Sulfolobus solfataricus [TaxId: 2287] [89325] (1) picpic
  3. Replication protein A 70 KDa subunit (RPA70) [50267]
    duplication: consists of three domains of this fold; contains zinc-finger insert in the C-terminal domain, residues 479-511
    1. Human (Homo sapiens) [TaxId: 9606] [50268] (6) picpic
  4. Replication protein A 32 KDa subunit (RPA32) fragment [50269]
    1. Human (Homo sapiens) [TaxId: 9606] [50270] (10) picpic
  5. Replication protein A 14 KDa (RPA14) subunit [50271]
    1. Human (Homo sapiens) [TaxId: 9606] [50272] (10) picpic
  6. CDC13 ssDNA-binding domain [74948]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [74949] (2) picpic
  7. Telomere end binding protein alpha subunit [50273]
    duplication: consists of three domains of this fold
    1. Oxytricha nova [TaxId: 200597] [50274] (18) picpic
  8. Core domain of telomere end binding protein beta subunit [50275]
    1. Oxytricha nova [TaxId: 200597] [50276] (14) picpic
  9. Protection of telomeres protein 1, Pot1 [101761]
    1. Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] [101762] (2) picpic
    2. Human (Homo sapiens) [TaxId: 9606] [117190] (1) picpic
      SQ Q9NUX5 6-299
  10. OB-fold domains of BRCA2 [82099]
    duplication: tandem repeat of three OB-fold domains
    1. Mouse (Mus musculus) [TaxId: 10090] [82100] (2) picpic
    2. Rat (Rattus norvegicus) [TaxId: 10116] [82101] (1) picpic
  11. Primosomal replication protein N, PriB [117191]
    1. Escherichia coli [TaxId: 562] [117192] (4) picpic
      SQ P07013
  12. Hypothetical protein At4g28440 (F20O9.120) [117193]
    1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [117194] (1) picpic
      SQ O49453 14-145
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk