Structural Classification of Proteins
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Family: DNA-binding domain of retroviral integrase

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: SH3-like barrel [50036]
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. Superfamily: DNA-binding domain of retroviral integrase [50122]
    link to SUPERFAMILY database - Superfamily
  5. Family: DNA-binding domain of retroviral integrase [50123]

Protein Domains:

  1. DNA-binding domain of retroviral integrase [50124]
    1. Human immunodeficiency virus type 1 [TaxId: 11676] [50125] (4)
      1. 1ex4 picpicxref
        complexed with cps; mutant
        1. region a:223-270 [24627] picpiclink
        2. region b:223-270 [24628] picpiclink
      2. 1ihw picpic
        1. chain a [24631] picpiclink
        2. chain b [24632] picpiclink
      3. 1ihv picpic
        1. chain a [24629] picpiclink
        2. chain b [24630] picpiclink
      4. 1qmc picpic
        1. chain a [24633] picpiclink
        2. chain b [24634] picpiclink
    2. Rous sarcoma virus RSV [TaxId: 11886] [50126] (2)
      1. 1c0m picpicxref
        mutant
        1. region a:217-269 [24635] picpiclink
        2. region b:217-269 [24636] picpiclink
        3. region c:217-270 [24637] picpiclink
        4. region d:217-269 [24638] picpiclink
      2. 1c1a picpicxref
        mutant
        1. region a:217-272 [24639] picpiclink
        2. region b:217-268 [24640] picpiclink
    3. Simian immunodeficiency virus [TaxId: 11723] [50127] (1)
      1. 1c6v picpicxref
        mutant
        1. chain x [24641] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk