Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: Group II dsDNA viruses VP

duplication: consists of two domains of this fold packed together like the nucleoplasmin subunits
trimeric; in the trimers, the domains are arranged around pseudo six-fold axis
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632]
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily: Group II dsDNA viruses VP [49749]
    duplication: consists of two domains of this fold packed together like the nucleoplasmin subunits
    trimeric; in the trimers, the domains are arranged around pseudo six-fold axis
    link to SUPERFAMILY database - Superfamily

Families:

  1. Coat protein p3 [49750] (1) picpic
  2. Major capsid protein vp54 [82013] (1) picpic
  3. Adenovirus hexon [49753] (2) picpic
    each domain is heavily decorated with many insertions
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk