Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: RmlC-like cupins

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Double-stranded beta-helix [51181]
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. Superfamily: RmlC-like cupins [51182]
    link to SUPERFAMILY database - Superfamily

Families:

  1. dTDP-sugar isomerase [51183] (9) picpic
  2. Glucose-6-phosphate isomerase, GPI [89403] (2) picpic
  3. Hypothetical protein TM1112 [89406] (1) picpic
  4. TM1287-like [89409] (4) picpic
  5. TM1459-like [101976] (2) picpic
  6. Germin/Seed storage 7S protein [51187] (9) picpic
  7. YlbA-like [101979] (4) picpic
    Pfam 05899; formerly pfam06038; duplication: consists of two germin-like domains
  8. Pirin-like [101984] (2) picpic
    Share a common two-domain fold with the 7S protein; there is a metal-binding site in the N-terminal domain similar to the metal-binding site of germin
  9. Quercetin 2,3-dioxygenase-like [75035] (2) picpic
    Share a common two-domain fold with the 7S protein; there is a metal-binding site in the N-terminal domain similar to the metal-binding site of germin
  10. Type I phosphomannose isomerase [51191] (3) picpic
    Share a common two-domain fold with the 7S protein; there is a metal-binding site in the N-terminal domain similar to the metal-binding site of germin
  11. Homogentisate dioxygenase [51194] (1) picpic
    Share a common two-domain fold with the 7S protein; there is a metal-binding site in the C-terminal domain similar to the metal-binding site of germin
  12. Acireductone dioxygenase [82191] (2) picpic
  13. KduI-like [110318] (2) picpic
    Pfam 04962: duplication: consists of two germin-like domains
  14. Ureidoglycolate hydrolase AllA [117312] (3) picpic
    Pfam 04115; beta-hairpin-swapped dimeric protein of the germin-like fold
  15. Probable transcriptional regulator VC1968, C-terminal domain [117315] (1) picpic
  16. YML079-like [117318] (3) picpic
    Pfam 06172; DUF985
  17. PA5104-like [141609] (1) picpic
    Pfam 05962; DUF886; duplication: consists of two germin-like domains; overall structural similarity to the YlbA-like family (scop_fa 101979) except a deletion in the interdomain linker region
  18. MJ0764-like [141612] (1) picpic
  19. Cysteine dioxygenase type I [141615] (4) picpic
    Pfam 05995, CDO_I
  20. 3-hydroxyanthranilic acid dioxygenase-like [141618] (2) picpic
    Pfam 06052; 3-HAO
  21. Acetylacetone-cleaving enzyme-like [159293] (1) picpic
    PfamB 026844
  22. VPA0057-like [159296] (1) picpic
    Pfam 06865; DUF1255; non-canonical dimerisation mode
  23. Gentisate 1,2-dioxygenase-like [159299] (3) picpic
    Share a common two-domain fold with the 7S protein; there is a metal-binding site in the N-terminal domain similar to the metal-binding site of germin; homotetramer
  24. EutQ-like [159304] (1) picpic
    Pfam 06249
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk