Structural Classification of Proteins
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Protein: Class II MHC alpha chain, C-terminal domain from Mouse (Mus musculus), I-A group [TaxId: 10090]

probably orthologous to the human HLA-DQ group

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Immunoglobulin-like beta-sandwich [48725]
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily: Immunoglobulin [48726]
    link to SUPERFAMILY database - Superfamily
  5. Family: C1 set domains (antibody constant domain-like) [48942]
  6. Protein: Class II MHC alpha chain, C-terminal domain [88618]
  7. Species: Mouse (Mus musculus), I-A group [TaxId: 10090] [88624]
    probably orthologous to the human HLA-DQ group

PDB Entry Domains:

  1. 1iak picpicxrefxrefxref
    complexed with nag
    1. region a:82-181 [21625] picpiclink
  2. 2g9h picpicxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    complexed with dio, epe, so4, zn
    1. region a:83-179 [134802] picpiclink
  3. 2ipk picpicxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    complexed with 4dp, ace; mutant
    1. region a:83-179 [137577] picpiclink
  4. 2p24 picpicxref
    automatically matched to d1k2da1
    1. region a:82-181 [149169] picpiclink
  5. 2pxy picpicxrefxrefxref
    automatically matched to d1k2da1
    mutant
    1. region c:82-180 [149922] picpiclink
  6. 1muj picpicxrefxrefxref
    complexed with nag
    1. region a:84-183 [79488] picpiclink
  7. 1k2d picpicxrefxrefxref
    complexed with nag
    1. region a:82-181 [84291] picpiclink
  8. 1es0 picpicxrefxrefxref
    contains covalently bound peptides
    1. region a:83-180 [21643] picpiclink
  9. 1u3h picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    mutant
    1. region c:82-181 [119510] picpiclink
  10. 1u3h picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    mutant
    1. region g:82-181 [119514] picpiclink
  11. 2icw picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    mutant
    1. region a:83-179 [137243] picpiclink
  12. 2icw picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    mutant
    1. region d:83-179 [137247] picpiclink
  13. 3c5z picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    1. region c:83-182 [155953] picpiclink
  14. 3c5z picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    1. region g:83-182 [155957] picpiclink
  15. 1lnu picpicxrefxrefxref
    complexed with nag
    1. region a:84-182 [74097] picpiclink
    2. region c:84-182 [74101] picpiclink
    3. region e:84-182 [74105] picpiclink
    4. region g:84-182 [74109] picpiclink
  16. 2z31 picpicxrefxrefxref
    automatically matched to d1k2da1
    1. region c:82-180 [153951] picpiclink
  17. 2oje picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    complexed with po4
    1. region a:83-179 [139103] picpiclink
  18. 2oje picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    complexed with po4
    1. region e:83-179 [139108] picpiclink
  19. 2iam picpicxrefxrefxref
    automatically matched to d1k2da1
    mutant
    1. region a:83-179 [137158] picpiclink
  20. 2ian picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    mutant
    1. region a:83-179 [137162] picpiclink
  21. 2ian picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    mutant
    1. region f:83-179 [137166] picpiclink
  22. 2ian picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    mutant
    1. region k:83-179 [137170] picpiclink
  23. 2ian picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    mutant
    1. region p:83-179 [137174] picpiclink
  24. 2iad picpicxrefxrefxref
    contains covalently bound peptides
    1. region a:83-186 [21639] picpiclink
  25. 2fse picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    1. region a:83-181 [134017] picpiclink
  26. 2fse picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    1. region c:83-180 [134021] picpiclink
  27. 1f3j picpicxrefxrefxref
    complexed with nag
    1. region a:83-181 [21645] picpiclink
    2. region d:83-181 [21647] picpiclink
  28. 1iao picpicxrefxrefxref
    complexed with nag
    1. region a:83-178 [21641] picpiclink
  29. 3c60 picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    1. region c:83-182 [155961] picpiclink
  30. 3c60 picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    1. region g:83-182 [155965] picpiclink
  31. 1zgl picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    1. region a:83-179 [125031] picpiclink
  32. 1zgl picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    1. region d:83-179 [125035] picpiclink
  33. 1zgl picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    1. region g:83-179 [125039] picpiclink
  34. 1zgl picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    1. region j:83-179 [125043] picpiclink
  35. 3c6l picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    complexed with ca
    1. region c:83-182 [155979] picpiclink
  36. 3c6l picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    complexed with ca
    1. region g:83-182 [155985] picpiclink
  37. 1ymm picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1k2da1
    complexed with nag; mutant
    1. region a:83-179 [123701] picpiclink
  38. 1d9k picpicxrefxrefxrefxrefxref
    1. region c:82-182 [21627] picpiclink
    2. region g:82-182 [21629] picpiclink
  39. 1jl4 picpicxrefxrefxrefxrefxref
    1. region a:82-181 [63157] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk