Structural Classification of Proteins
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Family: RNA polymerase II subunit RBP4 (RpoF)

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: SAM domain-like [47768]
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. Superfamily: HRDC-like [47819]
    link to SUPERFAMILY database - Superfamily
  5. Family: RNA polymerase II subunit RBP4 (RpoF) [69044]

Protein Domains:

  1. RNA polymerase II subunit RBP4 (RpoF) [69045]
    includes the N-terminal heterodimerisation alpha-hairpin
    1. Archaeon Methanococcus jannaschii [TaxId: 2190] [69046] (1)
      1. 1go3 picpicxrefxref
        1. chain f [65407] picpiclink
        2. chain n [65409] picpiclink
    2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [116939] (1)
      SQ P20433 46-221
      1. 1y14 picpicxrefxref
        1. chain a [116322] picpiclink
        2. chain c [116325] picpiclink
    3. Human (Homo sapiens) [TaxId: 9606] [140642] (4)
      SQ O15514 14-142
      1. 2c35 picpicxrefxrefxrefxrefxrefxrefxrefxref
        1. region a:14-142 [129711] picpiclink
      2. 2c35 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2C35 A:14-142
        1. region c:14-142 [129714] picpiclink
      3. 2c35 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2C35 A:14-142
        1. region e:14-139 [129717] picpiclink
      4. 2c35 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2C35 A:14-142
        1. region g:14-139 [129720] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk