Structural Classification of Proteins

Superfamily: Ribosomal protein L11, C-terminal domain

: uperfamily

Lineage:

Root: scop
Class: All alpha proteins [46456]
Fold: DNA/RNA-binding 3-helical bundle [46688]
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily: Ribosomal protein L11, C-terminal domain [46906]
uperfamily

Families:

Ribosomal protein L11, C-terminal domain [46907] (6)
1. Ribosomal protein L11, C-terminal domain [46908]
  1. Bacillus stearothermophilus [TaxId: 1422] [46909] (9)
    1. 1hc8
      complexed with gtp, k, mg, os; mutant
      1. chain a [70963]
      2. chain b [70964]
    2. 1y39
      complexed with 3co, gol, gtp, k, mg; mutant
      1. region a:2-75 [145899]
    3. 1y39
      automatically matched to 1Y39 A:2-75
      complexed with 3co, gol, gtp, k, mg; mutant
      1. region b:205-275 [145900]
    4. 1qa6
      complex with a fragment of 23S rRNA
      complexed with mg, os; mutant
      1. chain a [16240]
      2. chain b [16241]
    5. 1fox
      mutant
      1. chain a [16242]
    6. 2fow
      mutant
      1. chain a [16244]
    7. 1aci
      1. chain a [16246]
    8. 1fow
      mutant
      1. chain a [16243]
    9. 1foy
      mutant
      1. chain a [16245]
  2. Thermotoga maritima [TaxId: 2336] [46910] (6)
    1. 1mms
      protein/RNA complex; complexed with cd, mg, mmc; mutant
      1. chain b [16248]
    2. 1mms
      protein/RNA complex; complexed with cd, mg, mmc; mutant
      1. region a:71-140 [16247]
    3. 1yl3
      automatically matched to d1mmsa1
      1. region l:71-140 [123586]
    4. 2b66
      automatically matched to d1mmsa1
      1. region k:71-140 [127961]
    5. 2b9n
      automatically matched to d1mmsa1
      1. region k:71-140 [128153]
    6. 2b9p
      automatically matched to d1mmsa1
      1. region k:71-140 [128190]
  3. Archaeon Haloarcula marismortui [TaxId: 2238] [109705] (39)
    SQ P14122 67-136
    1. 1vqo
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3
      1. region i:71-140 [120370]
    2. 3cc2
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
      1. region i:66-129 [156178]
    3. 1vq8
      automatically matched to d1s72i_
      complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
      1. region i:71-140 [120196]
    4. 1vqp
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, dcz, hfa, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
      1. region i:71-140 [120399]
    5. 1yhq
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3, zit; mutant
      1. region i:66-135 [123191]
    6. 1vql
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, tse, ur3
      1. region i:71-140 [120283]
    7. 1vqk
      automatically matched to d1s72i_
      complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
      1. region i:71-140 [120254]
    8. 1s72
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
      1. chain i [105328]
    9. 1vqm
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, po2, ppu, psu, sr, ur3
      1. region i:71-140 [120312]
    10. 3ccm
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region i:66-129 [156339]
    11. 1vqn
      automatically matched to d1s72i_
      complexed with 1ma, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, ppu, psu, sr, ur3
      1. region i:71-140 [120341]
    12. 3cc7
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region i:66-129 [156227]
    13. 1yi2
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, ery, k, mg, na, omg, omu, psu, ur3; mutant
      1. region i:66-135 [123238]
    14. 1yij
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, tel, ur3; mutant
      1. region i:66-135 [123306]
    15. 3ccu
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region i:66-129 [156435]
    16. 1vq7
      automatically matched to d1s72i_
      complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, pae, psu, ur3
      1. region i:71-140 [120167]
    17. 3cce
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region i:66-129 [156267]
    18. 3ccl
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region i:66-129 [156315]
    19. 1vq4
      automatically matched to d1s72i_
      complexed with 1ma, 2op, 5aa, cd, cl, k, mg, na, omg, omu, po2, psu, ur3
      1. region i:71-140 [120080]
    20. 2otl
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, gir, k, mg, na, omg, omu, psu, ur3
      1. region i:71-140 [139354]
    21. 1vq5
      automatically matched to d1s72i_
      complexed with 1ma, 2op, 5aa, cd, cl, dcz, k, mg, na, omg, omu, po2, psu, ur3
      1. region i:71-140 [120109]
    22. 1vq9
      automatically matched to d1s72i_
      complexed with 1ma, aca, cd, cl, k, mg, na, omg, omu, psu, sps, sr, ur3
      1. region i:71-140 [120225]
    23. 3ccv
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region i:66-129 [156459]
    24. 1yit
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3, vir, vrs
      1. region i:66-135 [123349]
    25. 1vq6
      automatically matched to d1s72i_
      complexed with 1ma, 5aa, aca, btn, cd, cl, hfa, k, mg, na, omg, omu, psu, ur3
      1. region i:71-140 [120138]
    26. 3cc4
      automatically matched to d1s72i_
      complexed with 1ma, anm, cd, cl, k, mg, na, omg, omu, psu, sr, ur3
      1. region i:66-129 [156203]
    27. 3ccq
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region i:66-129 [156363]
    28. 3cd6
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, ppu, psu, sr, ur3; mutant
      1. region i:66-129 [156483]
    29. 2otj
      automatically matched to d1s72i_
      complexed with 13t, 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3
      1. region i:71-140 [139325]
    30. 3ccs
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region i:66-129 [156411]
    31. 3cma
      automatically matched to d1s72i_
      complexed with 1ma, 8an, aca, cd, cl, k, mg, na, omg, omu, phe, psu, sr, ur3
      1. region i:66-129 [156779]
    32. 1yjw
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, syb, ur3; mutant
      1. region i:66-135 [123473]
    33. 2qex
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, neg, omg, omu, psu, ur3
      1. region i:71-134 [150697]
    34. 3ccr
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region i:66-129 [156387]
    35. 3ccj
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, sr, ur3; mutant
      1. region i:66-129 [156291]
    36. 1yjn
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, cly, k, mg, na, omg, omu, psu, ur3; mutant
      1. region i:66-135 [123441]
    37. 1yj9
      automatically matched to d1s72i_
      complexed with 1ma, cd, cl, k, mg, na, omg, omu, psu, ur3; mutant
      1. region i:66-135 [123402]
    38. 3cme
      automatically matched to d1s72i_
      complexed with 1ma, 8an, aca, cd, cl, k, mg, na, omg, omu, phe, psu, sr, ur3
      1. region i:66-129 [156816]
    39. 2qa4
      automatically matched to d1s72i_
      complexed with cd, cl, k, mg, na, omg, omu, psu, ur3
      1. region i:67-130 [150182]
  4. Deinococcus radiodurans [TaxId: 1299] [158348] (4)
    SQ Q9RSS7 72-144
    1. 1xbp
      automatically matched to 2ZJQ F:72-144
      complexed with mul
      1. region g:72-143 [145872]
    2. 2zjq
      Representative structure
      1. region f:72-144 [154529]
    3. 3cf5
      automatically matched to 2ZJQ F:72-144
      complexed with mg, txx
      1. region f:72-144 [156545]
    4. 2zjp
      automatically matched to 2ZJQ F:72-144
      complexed with mg, nsh, zn
      1. region f:72-144 [154497]
  5. Escherichia coli [TaxId: 562] [158349] (29)
    SQ P0A7J7 73-141
    1. 2gyc
      automatically matched to 2AW4 I:73-141
      1. region g:73-140 [145267]
    2. 2gya
      automatically matched to 2AW4 I:73-141
      1. region g:73-140 [145245]
    3. 2qam
      automatically matched to 2AW4 I:73-141
      complexed with mg, nmy, zn
      1. region i:73-141 [150248]
    4. 2qao
      automatically matched to 2AW4 I:73-141
      complexed with mg, nmy, zn
      1. region i:73-141 [150301]
    5. 2i2t
      automatically matched to 2AW4 I:73-141
      complexed with mg, zn
      1. region i:73-141 [145450]
    6. 2i2v
      automatically matched to 2AW4 I:73-141
      complexed with mg, zn
      1. region i:73-141 [145492]
    7. 2qbe
      automatically matched to 2AW4 I:73-141
      complexed with mg, zn
      1. region i:73-141 [150468]
    8. 2qbg
      automatically matched to 2AW4 I:73-141
      complexed with mg, zn
      1. region i:73-141 [150522]
    9. 2qoz
      automatically matched to 2AW4 I:73-141
      complexed with mg, nmy, zn
      1. region i:73-141 [151124]
    10. 2qp1
      automatically matched to 2AW4 I:73-141
      complexed with mg, nmy, zn
      1. region i:73-141 [151177]
    11. 3df2
      automatically matched to 2AW4 I:73-141
      complexed with mg, zn
      1. region i:73-141 [157637]
    12. 3df4
      automatically matched to 2AW4 I:73-141
      complexed with mg, zn
      1. region i:73-141 [157691]
    13. 2qba
      automatically matched to 2AW4 I:73-141
      complexed with lll, mg, zn
      1. region i:73-141 [150361]
    14. 2qbc
      automatically matched to 2AW4 I:73-141
      complexed with lll, mg, zn
      1. region i:73-141 [150414]
    15. 2qbi
      automatically matched to 2AW4 I:73-141
      complexed with lll, mg, zn
      1. region i:73-141 [150576]
    16. 2qbk
      automatically matched to 2AW4 I:73-141
      complexed with lll, mg, zn
      1. region i:73-141 [150630]
    17. 2qov
      automatically matched to 2AW4 I:73-141
      complexed with mg, zn
      1. region i:73-141 [151018]
    18. 2qox
      automatically matched to 2AW4 I:73-141
      complexed with mg, zn
      1. region i:73-141 [151071]
    19. 1vs6
      automatically matched to 2AW4 I:73-141
      complexed with mg
      1. region i:73-141 [144465]
    20. 1vs8
      automatically matched to 2AW4 I:73-141
      complexed with mg
      1. region i:73-141 [144506]
    21. 2aw4
      Representative structure
      complexed with mg
      1. region i:73-141 [144874]
    22. 2awb
      automatically matched to 2AW4 I:73-141
      complexed with mg
      1. region i:73-141 [144915]
    23. 2z4l
      automatically matched to 2AW4 I:73-141
      complexed with mg, par, zn
      1. region i:73-141 [154086]
    24. 2z4n
      automatically matched to 2AW4 I:73-141
      complexed with mg, par, zn
      1. region i:73-141 [154140]
    25. 2vhm
      automatically matched to 2AW4 I:73-141
      complexed with mg; mutant
      1. region i:73-141 [153071]
    26. 2vhn
      automatically matched to 2AW4 I:73-141
      complexed with mg
      1. region i:73-141 [153103]
    27. 2rdo
      automatically matched to 2AW4 I:73-141
      1. region i:73-141 [151948]
    28. 2j28
      automatically matched to 2AW4 I:73-141
      complexed with mg
      1. region i:73-141 [145631]
    29. 3deg
      automatically matched to 2AW4 I:73-141
      complexed with 1ma, 2mg, 5mc, 5mu, 7mg, h2u, m2g, omc, omg, psu, yg
      1. region h:73-141 [157574]
  6. Thermus thermophilus [TaxId: 274] [158350] (16)
    SQ P36238 70-139! SQ P36238 71-137
    1. 3cjr
      complexed with sfg; mutant
      1. region b:71-137 [156712]
    2. 3cjt
      automatically matched to 2HGJ L:70-139
      complexed with 2mm, cl, edo, no3, sah, sam; mutant
      1. region b:70-139 [156716]
    3. 3cjt
      automatically matched to 2HGJ L:70-139
      complexed with 2mm, cl, edo, no3, sah, sam; mutant
      1. region f:70-139 [156718]
    4. 3cjt
      automatically matched to 2HGJ L:70-139
      complexed with 2mm, cl, edo, no3, sah, sam; mutant
      1. region j:70-139 [156720]
    5. 3cjt
      automatically matched to 2HGJ L:70-139
      complexed with 2mm, cl, edo, no3, sah, sam; mutant
      1. region n:70-139 [156722]
    6. 2nxn
      automatically matched to 2HGJ L:70-139
      1. region b:70-139 [145699]
    7. 3cjq
      automatically matched to 3CJR B:71-137
      complexed with 2mm, iod, sah; mutant
      1. region b:71-137 [156703]
    8. 3cjq
      automatically matched to 3CJR B:71-137
      complexed with 2mm, iod, sah; mutant
      1. region e:71-137 [156706]
    9. 3cjq
      automatically matched to 3CJR B:71-137
      complexed with 2mm, iod, sah; mutant
      1. region h:71-137 [156709]
    10. 2h8w
      automatically matched to 2HGJ L:70-139
      1. region a:70-139 [147243]
    11. 2e34
      automatically matched to 2HGJ L:70-139
      1. region a:70-139 [146670]
    12. 2e35
      automatically matched to 2HGJ L:70-139
      1. region a:70-139 [146672]
    13. 2e36
      automatically matched to 2HGJ L:70-139
      1. region a:70-139 [146674]
    14. 2hgq
      automatically matched to 2HGJ L:70-139
      1. region l:70-139 [145346]
    15. 2hgj
      Representative structure
      1. region l:70-139 [145314]
    16. 2hgu
      automatically matched to 2HGJ L:70-139
      1. region l:70-139 [145378]