Structural Classification of Proteins
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Protein: Vacuolar protein sorting-associated protein VPS25 from Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

SQ P47142

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: DNA/RNA-binding 3-helical bundle [46688]
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. Superfamily: "Winged helix" DNA-binding domain [46785]
    contains a small beta-sheet (wing)
    link to SUPERFAMILY database - Superfamily
  5. Family: Vacuolar sorting protein domain [109692]
    duplication: tandem repeat of two "winged-helix" domains
  6. Protein: Vacuolar protein sorting-associated protein VPS25 [109697]
  7. Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [109698]
    SQ P47142

PDB Entry Domains:

  1. 1xb4 picpic
    automatically matched to d1u5tc1
    1. region a:2-125 [121832] picpiclink
  2. 1xb4 picpic
    automatically matched to d1u5tc2
    1. region a:126-199 [121833] picpiclink
  3. 1xb4 picpic
    automatically matched to d1u5tc1
    1. region b:2-125 [121834] picpiclink
  4. 1xb4 picpic
    automatically matched to d1u5tc2
    1. region b:126-199 [121835] picpiclink
  5. 1xb4 picpic
    automatically matched to d1u5tc1
    1. region c:3-125 [121836] picpiclink
  6. 1xb4 picpic
    automatically matched to d1u5tc2
    1. region c:126-199 [121837] picpiclink
  7. 1xb4 picpic
    automatically matched to d1u5tc1
    1. region d:2-125 [121838] picpiclink
  8. 1xb4 picpic
    automatically matched to d1u5tc2
    1. region d:126-199 [121839] picpiclink
  9. 1u5t picpicxrefxref
    1. region c:2-125 [107688] picpiclink
    2. region c:126-199 [107689] picpiclink
    3. region d:2-125 [107690] picpiclink
    4. region d:126-199 [107691] picpiclink
  10. 1w7p picpicxrefxref
    1. region b:1-125 [114321] picpiclink
    2. region b:126-199 [114322] picpiclink
    3. region c:1-125 [114323] picpiclink
    4. region c:126-199 [114324] picpiclink

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk