Structural Classification of Proteins
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Family: CAP C-terminal domain-like

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: DNA/RNA-binding 3-helical bundle [46688]
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. Superfamily: "Winged helix" DNA-binding domain [46785]
    contains a small beta-sheet (wing)
    link to SUPERFAMILY database - Superfamily
  5. Family: CAP C-terminal domain-like [46796]

Protein Domains:

  1. Catabolite gene activator protein (CAP), C-terminal domain [46797]
    N-terminal domain has double beta-helix fold
    1. Escherichia coli [TaxId: 562] [46798] (26) picpic
  2. CO-sensing protein CooA, C-terminal domain [46799]
    1. Rhodospirillum rubrum [TaxId: 1085] [46800] (1) picpic
  3. Listeriolysin regulatory protein PrfA, C-terminal domain [88975]
    1. Bacteria (Listeria monocytogenes) [TaxId: 1639] [88976] (11) picpic
  4. Transcriptional regulator PG0396, C-terminal domain [140229]
    1. Porphyromonas gingivalis [TaxId: 837] [140230] (1) picpic
      SQ Q7MAW7 152-232
  5. Probable transcription regulator BT4300, C-terminal domain [140231]
    1. Bacteroides thetaiotaomicron [TaxId: 818] [140232] (1) picpic
      SQ Q89ZS6 148-220
  6. Transcriptional regulator TTHA1359, C-terminal domain [140233]
    1. Thermus thermophilus [TaxId: 274] [140234] (1) picpic
      SQ Q5SIL0 118-199
  7. Cyclic AMP receptor-like protein Vfr [158266]
    1. Pseudomonas aeruginosa [TaxId: 287] [158267] (1) picpic
      SQ P55222 143-213
  8. Chlorophenol reduction protein CprK [158268]
    1. Desulfitobacterium dehalogenans [TaxId: 36854] [158269] (2) picpic
      SQ Q9LAS2 148-226
    2. Desulfitobacterium hafniense [TaxId: 49338] [158270] (7) picpic
      SQ Q18R04 148-227! SQ Q18R04 148-229
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk