Structural Classification of Proteins
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Family: C-terminal fragment of elongation factor SelB

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: DNA/RNA-binding 3-helical bundle [46688]
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. Superfamily: "Winged helix" DNA-binding domain [46785]
    contains a small beta-sheet (wing)
    link to SUPERFAMILY database - Superfamily
  5. Family: C-terminal fragment of elongation factor SelB [74683]

Protein Domains:

  1. C-terminal fragment of elongation factor SelB [74684]
    duplication: tandem repeat of four "winged helix" domains
    1. Moorella thermoacetica [TaxId: 1525] [74685] (21)
      1. 2v9v picpic
        automatically matched to d1lvaa1
        complexed with cl, na
        1. region a:377-437 [152809] picpiclink
      2. 2v9v picpic
        automatically matched to d1lvaa2
        complexed with cl, na
        1. region a:438-510 [152810] picpiclink
      3. 1lva picpic
        complexed with mse, so4, y1
        1. region a:377-437 [74276] picpiclink
        2. region a:438-510 [74277] picpiclink
        3. region a:511-574 [74278] picpiclink
        4. region a:575-634 [74279] picpiclink
      4. 2uwm picpic
        automatically matched to d1lvaa2
        1. region a:441-510 [139992] picpiclink
      5. 2uwm picpic
        automatically matched to d1lvaa3
        1. region a:511-574 [139993] picpiclink
      6. 2uwm picpic
        automatically matched to d1lvaa4
        1. region a:575-633 [139994] picpiclink
      7. 2uwm picpic
        automatically matched to d1lvaa2
        1. region b:441-510 [139995] picpiclink
      8. 2uwm picpic
        automatically matched to d1lvaa3
        1. region b:511-574 [139996] picpiclink
      9. 2uwm picpic
        automatically matched to d1lvaa4
        1. region b:575-633 [139997] picpiclink
      10. 1wsu picpic
        automatically matched to d1lvaa3
        1. region a:512-574 [121245] picpiclink
      11. 1wsu picpic
        automatically matched to d1lvaa4
        1. region a:575-634 [121246] picpiclink
      12. 1wsu picpic
        automatically matched to d1lvaa3
        1. region b:512-574 [121247] picpiclink
      13. 1wsu picpic
        automatically matched to d1lvaa4
        1. region b:575-632 [121248] picpiclink
      14. 1wsu picpic
        automatically matched to d1lvaa3
        1. region c:517-574 [121249] picpiclink
      15. 1wsu picpic
        automatically matched to d1lvaa4
        1. region c:575-632 [121250] picpiclink
      16. 1wsu picpic
        automatically matched to d1lvaa3
        1. region d:512-574 [121251] picpiclink
      17. 1wsu picpic
        automatically matched to d1lvaa4
        1. region d:575-634 [121252] picpiclink
      18. 2ply picpic
        automatically matched to d1lvaa1
        complexed with ca, cl, mg, na; mutant
        1. region a:392-437 [149651] picpiclink
      19. 2ply picpic
        automatically matched to d1lvaa2
        complexed with ca, cl, mg, na; mutant
        1. region a:438-510 [149652] picpiclink
      20. 2ply picpic
        automatically matched to d1lvaa3
        complexed with ca, cl, mg, na; mutant
        1. region a:511-574 [149653] picpiclink
      21. 2ply picpic
        automatically matched to d1lvaa4
        complexed with ca, cl, mg, na; mutant
        1. region a:575-632 [149654] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk