Structural Classification of Proteins
home mail help root up expand collapse

Family: RpiR-like

Pfam 01418; contains two extra helices, one at each termini; overall arrangment of five helices is similar to the helical core of the lambda integrase-like catalytic domain (scop_fa 56350)

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: DNA/RNA-binding 3-helical bundle [46688]
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. Superfamily: Homeodomain-like [46689]
    consists only of helices
    link to SUPERFAMILY database - Superfamily
  5. Family: RpiR-like [158263]
    Pfam 01418; contains two extra helices, one at each termini; overall arrangment of five helices is similar to the helical core of the lambda integrase-like catalytic domain (scop_fa 56350)

Protein Domains:

  1. Putative transcriptional regulator YbbH [158264]
    1. Bacillus subtilis [TaxId: 1423] [158265] (3)
      SQ Q45581 1-83
      1. 2o3f picpic
        complexed with mly, so4
        1. region a:1-83 [148573] picpiclink
      2. 2o3f picpic
        automatically matched to 2O3F A:1-83
        complexed with mly, so4
        1. region b:2-83 [148574] picpiclink
      3. 2o3f picpic
        automatically matched to 2O3F A:1-83
        complexed with mly, so4
        1. region c:1-83 [148575] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk