Structural Classification of Proteins
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Fold: N-cbl like

4 helices; bundle, left-handed twist; left-handed superhelix

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: N-cbl like [47667]
    4 helices; bundle, left-handed twist; left-handed superhelix

Superfamilies:

  1. N-terminal domain of cbl (N-cbl) [47668] (1)
    link to SUPERFAMILY database - Superfamily
    1. N-terminal domain of cbl (N-cbl) [47669] (1)
      1. N-terminal domain of cbl (N-cbl) [47670]
        1. Human (Homo sapiens) [TaxId: 9606] [47671] (12)
          1. 3bux picpicxrefxrefxrefxref
            automatically matched to d1b47a2
            1. region b:48-177 [155648] picpiclink
          2. 3bux picpicxrefxrefxrefxref
            automatically matched to d1b47a2
            1. region d:48-177 [155651] picpiclink
          3. 3buw picpicxrefxrefxrefxref
            automatically matched to d1b47a2
            1. region b:48-177 [155642] picpiclink
          4. 3buw picpicxrefxrefxrefxref
            automatically matched to d1b47a2
            1. region d:48-177 [155645] picpiclink
          5. 1yvh picpicxrefxref
            automatically matched to d1b47a2
            complexed with mg
            1. region a:48-177 [124097] picpiclink
          6. 3bun picpicxrefxref
            automatically matched to d1b47a2
            1. region b:48-177 [155627] picpiclink
          7. 3bum picpicxrefxref
            automatically matched to d1b47a2
            1. region b:48-177 [155624] picpiclink
          8. 2cbl picpicxrefxref
            complexed with ca
            1. region a:47-177 [17774] picpiclink
          9. 1b47 picpicxrefxref
            complexed with ca
            1. region a:47-177 [17775] picpiclink
            2. region b:47-177 [17776] picpiclink
            3. region c:47-177 [17777] picpiclink
          10. 3buo picpicxrefxrefxrefxref
            automatically matched to d1b47a2
            1. region b:48-177 [155630] picpiclink
          11. 3buo picpicxrefxrefxrefxref
            automatically matched to d1b47a2
            1. region d:48-177 [155633] picpiclink
          12. 1fbv picpicxrefxrefxrefxref
            complexed with so4, zn
            1. region a:47-177 [17778] picpiclink
  2. Transferrin receptor-like dimerisation domain [47672] (1)
    link to SUPERFAMILY database - Superfamily
    1. Transferrin receptor-like dimerisation domain [47673] (2)
      1. Transferrin receptor ectodomain, C-terminal domain [47674]
        1. Human (Homo sapiens) [TaxId: 9606] [47675] (4)
          1. 1de4 picpicxrefxrefxrefxrefxref
            1. region c:609-756 [17779] picpiclink
            2. region f:609-756 [17780] picpiclink
            3. region i:609-756 [17781] picpiclink
          2. 1cx8 picpicxrefxref
            complexed with nag, sm
            1. region a:609-760 [17782] picpiclink
            2. region b:609-760 [17783] picpiclink
            3. region c:609-760 [17784] picpiclink
            4. region d:609-760 [17785] picpiclink
            5. region e:609-760 [17786] picpiclink
            6. region f:609-760 [17787] picpiclink
            7. region g:609-760 [17788] picpiclink
            8. region h:609-760 [17789] picpiclink
          3. 2nsu picpicxrefxrefxrefxref
            automatically matched to d1cx8a1
            1. region a:609-760 [138546] picpiclink
          4. 2nsu picpicxrefxrefxrefxref
            automatically matched to d1cx8a1
            1. region b:609-760 [138549] picpiclink
      2. Glutamate carboxypeptidase II [140574]
        1. Human (Homo sapiens) [TaxId: 9606] [140575] (17)
          SQ Q04609 594-750
          1. 3bi1 picpicxrefxref
            automatically matched to d1z8la1
            complexed with 3bi, bma, ca, cl, man, nag, zn
            1. region a:594-750 [155295] picpiclink
          2. 3bhx picpicxrefxref
            automatically matched to d1z8la1
            complexed with bhx, bma, ca, cl, man, nag, zn
            1. region a:594-750 [155289] picpiclink
          3. 2or4 picpicxrefxref
            automatically matched to 2C6C A:594-750
            complexed with bma, ca, cl, man, nag, qus, zn
            1. region a:594-750 [139258] picpiclink
          4. 3bi0 picpicxrefxref
            automatically matched to d1z8la1
            complexed with bix, bma, ca, cl, man, nag, zn
            1. region a:594-750 [155292] picpiclink
          5. 2pvw picpicxrefxref
            automatically matched to 2C6C A:594-750
            complexed with bma, ca, cl, g88, man, nag, zn
            1. region a:594-750 [139755] picpiclink
          6. 2oot picpicxrefxref
            automatically matched to 2C6C A:594-750
            complexed with bma, ca, cl, man, nag, zn
            1. region a:594-750 [139176] picpiclink
          7. 2c6c picpicxrefxref
            complexed with 24i, ca, cl, man, nag, zn
            1. region a:594-750 [129989] picpiclink
          8. 2pvv picpicxrefxref
            automatically matched to 2C6C A:594-750
            complexed with ca, cl, man, nag, ose, zn
            1. region a:594-750 [139752] picpiclink
          9. 2c6g picpicxrefxref
            automatically matched to 2C6C A:594-750
            complexed with bma, ca, cl, glu, man, nag, zn
            1. region a:594-750 [129992] picpiclink
          10. 2jbj picpicxrefxref
            automatically matched to 2C6C A:594-750
            complexed with bma, ca, cl, g88, man, nag, zn
            1. region a:594-750 [138250] picpiclink
          11. 2cij picpicxrefxref
            automatically matched to 2C6C A:594-750
            complexed with bma, ca, cl, man, met, nag, zn
            1. region a:594-750 [130493] picpiclink
          12. 2c6p picpicxrefxref
            automatically matched to 2C6C A:594-750
            complexed with bma, ca, cl, nag, po4, zn
            1. region a:594-750 [130001] picpiclink
          13. 2jbk picpicxrefxref
            automatically matched to 2C6C A:594-750
            complexed with bma, ca, cl, man, nag, qus, zn
            1. region a:594-750 [138253] picpiclink
          14. 1z8l picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2C6C A:594-750
            complexed with nag, ndg, zn
            1. region a:594-750 [124706] picpiclink
          15. 1z8l picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2C6C A:594-750
            complexed with nag, ndg, zn
            1. region b:594-750 [124709] picpiclink
          16. 1z8l picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2C6C A:594-750
            complexed with nag, ndg, zn
            1. region c:594-750 [124712] picpiclink
          17. 1z8l picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2C6C A:594-750
            complexed with nag, ndg, zn
            1. region d:594-750 [124715] picpiclink
  3. Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 [47676] (1)
    link to SUPERFAMILY database - Superfamily
    1. Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 [47677] (2)
      Smart 00509
      1. Transcription elongation factor TFIIS N-domain [47678]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [47679] (1)
          1. 1eo0 picpic
            1. chain a [17790] picpiclink
      2. Transcription elongation factor S-II protein 3 [116912]
        1. Mouse (Mus musculus) [TaxId: 10090] [116913] (1)
          SQ P23881 1-87
          1. 1wjt picpic
            Structural genomics target
            1. chain a [114711] picpiclink
  4. HIV integrase-binding domain [140576] (1)
    link to SUPERFAMILY database - Superfamily
    1. HIV integrase-binding domain [140577] (1)
      N-terminal part of PfamB 012949
      1. PC4 and SFRS1-interacting protein, PSIP1 [140578]
        1. Human (Homo sapiens) [TaxId: 9606] [140579] (3)
          SQ O75475 346-426! SQ O75475 347-429
          1. 2b4j picpicxrefxref
            complexed with gol, po4; mutant
            1. region c:346-426 [127835] picpiclink
          2. 2b4j picpicxrefxref
            automatically matched to 2B4J C:346-426
            complexed with gol, po4; mutant
            1. region d:346-426 [127836] picpiclink
          3. 1z9e picpic
            1. region a:347-429 [124756] picpiclink
  5. PG0775 C-terminal domain-like [158494] (1)
    1. PG0775 C-terminal domain-like [158495] (1)
      PfamB 133436
      1. Uncharacterized protein PG0775 [158496]
        Acyl-CoA dehydrogenase family protein
        1. Porphyromonas gingivalis [TaxId: 837] [158497] (2)
          SQ Q7MW70 443-564
          1. 2oku picpic
            1. region a:443-564 [148809] picpiclink
          2. 2oku picpic
            automatically matched to 2OKU A:443-564
            1. region b:445-560 [148810] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk